interface graph thumbnail
legend  pdf

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.


Dendrogram of similar interfaces ?

matrix format
structure nameCRYSTAL STRUCTURE OF ARABIDOPSIS CO CCT DOMAIN IN COMPLEX WITH NF- YB3/YC4 AND FT CORE2 DNA
(NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-3)
referenceLv et al. 'Plant 33 1182 2021
sourceARABIDOPSIS THALIANA
experimentX-ray (resolution=2.60, R-factor=0.197)
structural superfamilyHistone-fold;
sequence familyHistonelike transcription factor CBF/;
multimeric complexes7cvo_AB
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
  
  LTRC                                         +3kwq_E    
                                +--------------1 
  LGRA   L       +--------------2              +8he5_a    
                 !              ! 
  --RT         +-3              +--------------8siy_G    
               ! ! 
  LC--       +-4 +-----------------------------8bvw_e    
             ! ! 
  --RG     --5 +-----------------------------7uv9_E    
             ! 
  --RT       +-----------------------------8cww_A    
           

home
updated Sat Sep 14 02:08:04 2024