interface graph thumbnail
legend  pdf

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.


Dendrogram of similar interfaces ?

matrix format
structure nameCRYSTAL STRUCTURE OF ARABIDOPSIS CO CCT DOMAIN IN COMPLEX WITH NF- YB3/YC4 AND FT CORE2 DNA
(NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-3)
referenceLv et al. 'Plant 33 1182 2021
sourceARABIDOPSIS THALIANA
experimentX-ray (resolution=2.60, R-factor=0.197)
structural superfamilyHistone-fold;
sequence familyHistonelike transcription factor CBF/;
multimeric complexes7cvo_AB
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
  
  ------RA--         +-----------------------------7e9c_F    
                   +-8 
  ------RC--       ! +-----------------------------7ux9_E    
                   ! 
  LC--------       !                             +8bvw_e    
                 --9         +-------------------1 
  ------RT--       !         !                   +6px1_A    
                   !         ! 
  ------RARA       !         !                     +6a5l_g    
                   +---------7                   +-2 
  ------RG--                 !        +----------3 +8txv_G    
                             !        !          ! 
  ------RG--                 !    +---5          +8upf_G    
                             !    !   ! 
  --HGRTRG--                 +----6   +----------8rbx_V    
                                  ! 
  ------RT--                      !             +8u14_G    
                                  +-------------4 
  ------RC--                                    +7yqk_C    
                 

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updated Sat Jan 10 14:40:17 2026