interface graph thumbnail
legend  pdf

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.


Dendrogram of similar interfaces ?

matrix format
structure nameCRYSTAL STRUCTURE OF ARABIDOPSIS CO CCT DOMAIN IN COMPLEX WITH NF- YB2/YC3 AND FT CORE1 DNA
(CHIMERA OF NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-3 AND...)
referenceLv et al. 'Plant 33 1182 2021
sourceARABIDOPSIS THALIANA
experimentX-ray (resolution=3.30, R-factor=0.242)
structural superfamilyHistone-fold;
sequence familyHistonelike transcription factor CBF/; CCT motif; Core histone H2A/H2B/H3/H4;
multimeric complexes7cvq_AB 7cvq_KL 7cvq_PQ
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
  
  ----RA--RA                                     +6a5l_g    
                                    +------------2 
  ----RG----                 +------4            +8txv_G    
                             !      ! 
  ------RA--             +---6      +------------6g0l_D    
                         !   ! 
  ----RG----             !   +-------------------8jla_C    
                         ! 
  ----RT----       +-----8                       +8u14_G    
                   !     !        +--------------1 
  ----RG----       !     ! +------5              +8ox0_C    
                   !     ! !      ! 
  ----RG----       !     +-7      +--------------5x0y_G    
                 --9       ! 
  ----RA----       !       !          +----------1zla_C    
                   !       +----------3 
  --LCRT----       !                  +----------8hr1_E    
                   ! 
  RT--------       +-----------------------------9fgq_D    
                 

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updated Sun Aug 3 15:53:50 2025