interface graph thumbnail
legend  pdf

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.


Dendrogram of similar interfaces ?

matrix format
structure nameCRYSTAL STRUCTURE OF ARABIDOPSIS CO CCT DOMAIN IN COMPLEX WITH NF- YB2/YC3 AND FT CORE1 DNA
(CHIMERA OF NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-3 AND...)
referenceLv et al. 'Plant 33 1182 2021
sourceARABIDOPSIS THALIANA
experimentX-ray (resolution=3.30, R-factor=0.242)
structural superfamilyHistone-fold;
sequence familyHistonelike transcription factor CBF/; CCT motif; Core histone H2A/H2B/H3/H4;
multimeric complexes7cvq_AB 7cvq_KL 7cvq_PQ
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
  
  ------RARA                                        +6a5l_g    
                                     +--------------1 
  ------RC--                         !              +7yqk_C    
                                   +-4 
  ------RG--                       ! !             +8txv_G    
                                   ! +-------------3 
  --HGRTRG--                   +---5               +8rbx_V    
                               !   ! 
  ------RT--                   !   !              +8u14_G    
                            +--6   +--------------2 
  ------RG--                !  !                  +8upf_G    
                          +-7  ! 
  ------RA--              ! !  +------------------7e9c_F    
                   +------8 ! 
  ------RC--       !      ! +---------------------7ux9_E    
                 --9      ! 
  ------RT--       !      +----------------------6px1_A    
                   ! 
  RG--------       +-----------------------------7ccr_H    
                 

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updated Sat Jan 10 14:41:07 2026