interface graph thumbnail
legend  pdf

structure nameNON-SPECIFIC AND SPECIFIC INTERACTIONS WORK COOPERATIVELY TO PROMOTE CYTIDINE DEAMINATION CATALYZED BY APOBEC3A
(DNA DC->DU-EDITING ENZYME APOBEC-3A)
sourceHOMO SAPIENS
experimentNMR
structural superfamilyCytidine deaminase-like;
sequence familyAPOBEClike Nterminal domain; APOBEClike Cterminal domain;
multimeric complexes5sww_BD
redundant complexes5sww_A 8fii_B 8fij_B 8fik_A 8fil_B 8fim_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureNIHQKLHQWCYDYEHALR

Estimated binding specificities ?

contactlogo
# IC=9.775 IC/col=1.086 n_of_columns=9 specificity:   
A |  96  12  16   0   0   0  96  96   0
C |   0  12  16   0   0  96   0   0   0
G |   0  12  16   0   0   0   0   0   0
T |   0  60  48  96  96   0   0   0  96
scan!

home
updated Tue Dec 19 17:54:27 2023