Interface of input file ?

interface graph
legend  pdf

footprint
legend

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.


Dendrogram of similar interfaces ?

matrix format
structure nameCRYO-EM STRUCTURE OF THE NUCLEOSOME CONTAINING GIARDIA HISTONES
(HISTONE H4)
sourceGIARDIA INTESTINALIS
experimentNMR
structural superfamilyHistone-fold;
sequence familyCore histone H2A/H2B/H3/H4;
multimeric complexes7d69_ABCDEFGH
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
  
  --RG----                                  +8txv_G    
                                          +-1 
  --RA----                      +---------4 +1zla_C    
                                !         ! 
  --RG----                    +-5         +8ox0_C    
                              ! ! 
  --RT----                    ! !         +8u14_G    
                        +-----6 +---------2 
  --RG----              !     !           +5x0y_G    
                   +----8     ! 
  --RA--RA         !    !     +-----------6a5l_g    
                   !    ! 
  ----RA--         !    +-----------------6g0l_D    
                 +-9 
  LC------       ! !                      +8bvw_e    
                 ! !       +--------------3 
  --RT----     -10 +-------7              +8grq_A    
                 !         ! 
  LCRT----       !         +--------------8hr1_E    
                 !  
  --RG----       +------------------------8jla_C

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updated Sun Aug 3 15:56:21 2025