Interface of input file ?

interface graph
legend  pdf

footprint
legend

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.


Dendrogram of similar interfaces ?

matrix format
structure nameCRYO-EM STRUCTURE OF THE NUCLEOSOME CONTAINING GIARDIA HISTONES
(HISTONE H2B)
sourceGIARDIA INTESTINALIS
experimentNMR
structural superfamilyHistone-fold;
sequence familyCore histone H2A/H2B/H3/H4;
multimeric complexes7d69_ABCDEFGH
links to other resourcesNAKB PDBSum PDIdb DNAproDB 
  
  ----RC--         +-----------------------------7ux9_E    
                 +-7 
  ----RT--       ! +-----------------------------6px1_A    
                 ! 
  LC------       !                     +-------8bvw_e    
                 !         +-----------2 
  ----RA--     --8      +--4           +-------7e9c_F    
                 !      !  ! 
  ----RG--       !      !  +-------------------8upf_G    
                 !  +---5 
  ----RT--       !  !   !      +---------------8u14_G    
                 !  !   +------3 
  ----RG--       +--6          !              +8txv_G    
                    !          +--------------1 
  ----RARA          !                         +6a5l_g    
                    ! 
  --HGRG--          +--------------------------8rbx_V

home
updated Sat Jan 10 14:45:48 2026