Interface of input file ?

interface graph
legend  pdf

footprint
legend

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.


Dendrogram of similar interfaces ?

matrix format
structure nameCRYO-EM STRUCTURE OF THE NUCLEOSOME CONTAINING GIARDIA HISTONES
(HISTONE H3)
sourceGIARDIA INTESTINALIS
experimentNMR
structural superfamilyHistone-fold;
sequence familyCore histone H2A/H2B/H3/H4;
multimeric complexes7d69_ABCDEFGH
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
  
  LCRT----         +-----------------------------8hr1_E    
                 +-9 
  --RT----       ! +-----------------------------8grq_A    
                 !  
  LC------       !                    +--------8bvw_e    
                 !         +----------4 
  ----RA--     -10         !          +--------6g0l_D    
                 !      +--7 
  --RA----       !      !  !                   +1zla_C    
                 !      !  !   +---------------3 
  --RG----       !      !  +---6               +8ox0_C    
                 !      !      ! 
  --RG----       +------8      +---------------8jla_C    
                        ! 
  --RT----              !                      +8u14_G    
                        !       +--------------2 
  --RG----              !       !              +5x0y_G    
                        +-------5 
  --RA--RA                      !              +6a5l_g    
                                +--------------1 
  --RG----                                     +8txv_G

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updated Sun Aug 3 15:58:59 2025