Interface of input file ?

interface graph
legend  pdf

footprint
legend

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.


Dendrogram of similar interfaces ?

matrix format
structure nameCRYO-EM STRUCTURE OF THE NUCLEOSOME CONTAINING GIARDIA HISTONES
(HISTONE H2A)
sourceGIARDIA INTESTINALIS
experimentNMR
structural superfamilyHistone-fold;
sequence familyCore histone H2A/H2B/H3/H4; Histonelike transcription factor CBF/;
multimeric complexes7d69_ABCDEFGH
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
  
  LC----             +-----------------------------8bvw_e    
                   +-2 
  --LGRA   L       ! +-----------------------------8he5_a    
                 +-3 
  --LTRC         ! !                             +3kwq_E    
               +-4 +-----------------------------1 
  ----RT       ! !                               +8siy_G    
             --5 ! 
  ----RG       ! +-----------------------------7uv9_E    
               ! 
  ----RT       +-----------------------------8cww_A    
             

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updated Tue Dec 19 17:58:44 2023