Interface of input file ?

interface graph
legend  pdf

footprint
legend

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.


Dendrogram of similar interfaces ?

matrix format
structure nameCRYO-EM STRUCTURE OF THE NUCLEOSOME CONTAINING GIARDIA HISTONES
(HISTONE H2A)
sourceGIARDIA INTESTINALIS
experimentNMR
structural superfamilyHistone-fold;
sequence familyCore histone H2A/H2B/H3/H4; Histonelike transcription factor CBF/;
multimeric complexes7d69_ABCDEFGH
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
  
  ------RC--       +-----------------------------7yqk_C    
                   !  
  ------RARA       !                              +6a5l_g    
                   !            +-----------------1 
  ------RG--       !            !                 +8upf_G    
                   !        +---6 
  ------RG--       !        !   !     +-----------8txv_G    
                 -10        !   +-----5 
  ------RC--       !      +-7         +-----------7ux9_E    
                   !      ! ! 
  LC--------       !      ! !                     +8bvw_e    
                   !    +-8 +---------------------2 
  ------RT--       !    ! !                       +6px1_A    
                   !    ! ! 
  ------RGRG       !    ! !               +------8kcb_A    
                   +----9 +---------------4 
  ------RA--            !                 +------7e9c_F    
                        ! 
  ------RT--            !                       +8u14_G    
                        +-----------------------3 
  --HGRTRG--                                    +8rbx_V

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updated Sat Jan 10 14:49:25 2026