7dcs_ABC : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF HSF1 DNA-BINDING DOMAIN IN COMPLEX WITH 3-SITE HSE DNA (23 BP)
reference	Feng et al. Iscience 24 102951 2021
source	HOMO SAPIENS
experiment	X-ray (resolution=2.40, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7dcs_A interface=55,57,58,59,61,93, hvpafltklwtlvsdpdtdalicwspsgnsfhvfdqgqfakevlpkyfkhnnmaSfVRQlNmygfrkvvhddtefqhpcflrgqeqllenikRkv > 7dcs_B interface=55,57,58,59,61,100, hvpafltklwtlvsdpdtdalicwspsgnsfhvfdqgqfakevlpkyfkhnnmaSfVRQlNmygfrkvvhieqgglvddtefqhpcflrgqeqllenikRkv > 7dcs_C interface=55,58,59,61,92, hvpafltklwtlvsdpdtdalicwspsgnsfhvfdqgqfakevlpkyfkhnnmaSfvRQlNmygfrkvvhdtefqhpcflrgqeqllenikRkv
interface signature	SVRQNR/SVRQNR/SRQNR

Estimated binding specificities ?

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# IC=13.613 IC/col=0.972 n_of_columns=14

specificity:

A |   0   0   0  82  24   9  73   4   4   0   0  96   0  91
C |   1  96   0   6  24   9   4   9   4  96   0   0   0   1
G |   4   0  96   4  24   9  13   6   4   0   0   0  96   0
T |  91   0   0   4  24  69   6  77  84   0  96   0   0   4

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updated Sun Dec 15 04:16:23 2024