7dcs_ABC : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF HSF1 DNA-BINDING DOMAIN IN COMPLEX WITH 3-SITE HSE DNA (23 BP)
reference	Feng et al. Iscience 24 102951 2021
source	HOMO SAPIENS
experiment	X-ray (resolution=2.40, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	5hdn_C
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7dcs_A interface=55,57,58,59,61,93, hvpafltklwtlvsdpdtdalicwspsgnsfhvfdqgqfakevlpkyfkhnnmaSfVRQlNmygfrkvvhddtefqhpcflrgqeqllenikRkv > 7dcs_B interface=55,57,58,59,61,100, hvpafltklwtlvsdpdtdalicwspsgnsfhvfdqgqfakevlpkyfkhnnmaSfVRQlNmygfrkvvhieqgglvddtefqhpcflrgqeqllenikRkv > 7dcs_C interface=55,58,59,61,92, hvpafltklwtlvsdpdtdalicwspsgnsfhvfdqgqfakevlpkyfkhnnmaSfvRQlNmygfrkvvhdtefqhpcflrgqeqllenikRkv
interface signature	SVRQNR/SVRQNR/SRQNR

Estimated binding specificities ?

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# IC=14.609 IC/col=1.044 n_of_columns=14

specificity:

A |   0   0   0  96   0  84  79   7  79  13   3   0   0  92
C |   0  96   0   0   0   3   3   7   3   7   3  96   0   3
G |   0   0   0   0  96   3  11  10   7  11   6   0  96   1
T |  96   0  96   0   0   6   3  72   7  65  84   0   0   0

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updated Wed Sep 11 04:02:50 2024