7dcs_DEF : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF HSF1 DNA-BINDING DOMAIN IN COMPLEX WITH 3-SITE HSE DNA (23 BP)
reference	Feng et al. Iscience 24 102951 2021
source	HOMO SAPIENS
experiment	X-ray (resolution=2.40, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	5hdn_C
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7dcs_D interface=55,57,58,59,61,93, hvpafltklwtlvsdpdtdalicwspsgnsfhvfdqgqfakevlpkyfkhnnmaSfVRQlNmygfrkvvhidtefqhpcflrgqeqllenikRkv > 7dcs_E interface=54,56,57,58,60,61,103, vpafltklwtlvsdpdtdalicwspsgnsfhvfdqgqfakevlpkyfkhnnmaSfVRQlNMygfrkvvhieqgglvkperddtefqhpcflrgqeqllenikRkv > 7dcs_F interface=54,57,58,60,91, vpafltklwtlvsdpdtdalicwspsgnsfhvfdqgqfakevlpkyfkhnnmaSfvRQlNmygfrkvvhdtefqhpcflrgqeqllenikRkv
interface signature	SVRQNR/SVRQNMR/SRQNR

Estimated binding specificities ?

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# IC=14.630 IC/col=0.914 n_of_columns=16

specificity:

A |   0   0   0  86  24   0  73  24   4   0   0  96   0  82  68   9
C |   1  96   0   0  24   0   9  24   4  96   0   0   0   4   9  73
G |   4   0  96   4  24   0  10  24   6   0   0   0  96   6  15  10
T |  91   0   0   6  24  96   4  24  82   0  96   0   0   4   4   4

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updated Wed Sep 11 04:03:04 2024