interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF HSF1 DNA-BINDING DOMAIN IN COMPLEX WITH 3-SITE HSE DNA (24 BP)
referenceFeng et al. Iscience 24 102951 2021
sourceHOMO SAPIENS
experimentX-ray (resolution=2.36, R-factor=?)
structural superfamily"Winged helix" DNA-binding domain;
reference complex5hdn_C
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureSVRQNR/SVRQNR/SRQNR

Estimated binding specificities ?

readout + contactlogo
# IC=12.359 IC/col=0.951 n_of_columns=13 specificity:   
A |   3   0   3  96   0  85  74  24  85   7   5   0   4
C |   3  96   0   0   0   3   3  24   3  11   3  96   0
G |   3   0   0   0  96   5  16  24   5  14   3   0  92
T |  87   0  93   0   0   3   3  24   3  64  85   0   0
scan!

home
updated Tue Jan 6 22:14:15 2026