7dct_ABC : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF HSF1 DNA-BINDING DOMAIN IN COMPLEX WITH 3-SITE HSE DNA (24 BP)
reference	Feng et al. Iscience 24 102951 2021
source	HOMO SAPIENS
experiment	X-ray (resolution=2.36, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	5hdn_C
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7dct_A interface=55,57,58,59,61,92, hvpafltklwtlvsdpdtdalicwspsgnsfhvfdqgqfakevlpkyfkhnnmaSfVRQlNmygfrkvvhdtefqhpcflrgqeqllenikRkv > 7dct_B interface=55,57,58,59,61,100, hvpafltklwtlvsdpdtdalicwspsgnsfhvfdqgqfakevlpkyfkhnnmaSfVRQlNmygfrkvvhieqgglvddtefqhpcflrgqeqllenikRkv > 7dct_C interface=55,58,59,61,92, hvpafltklwtlvsdpdtdalicwspsgnsfhvfdqgqfakevlpkyfkhnnmaSfvRQlNmygfrkvvddtefqhpcflrgqeqllenikRkv
interface signature	SVRQNR/SVRQNR/SRQNR

Estimated binding specificities ?

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# IC=12.316 IC/col=0.947 n_of_columns=13

specificity:

A |   3   0   3  96   0  87  77  24  82  10   5   0   7
C |   3  96   0   0   0   3   3  24   3  13   3  96   0
G |   3   0   1   0  96   3  13  24   3   6   3   0  89
T |  87   0  92   0   0   3   3  24   8  67  85   0   0

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updated Wed Sep 11 04:03:16 2024