7dct_DEF : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF HSF1 DNA-BINDING DOMAIN IN COMPLEX WITH 3-SITE HSE DNA (24 BP)
reference	Feng et al. Iscience 24 102951 2021
source	HOMO SAPIENS
experiment	X-ray (resolution=2.36, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7dct_D interface=56,58,59,60,62,95, hhvpafltklwtlvsdpdtdalicwspsgnsfhvfdqgqfakevlpkyfkhnnmaSfVRQlNmygfrkvvhiddtefqhpcflrgqeqllenikRkv > 7dct_E interface=54,56,57,58,60,101, vpafltklwtlvsdpdtdalicwspsgnsfhvfdqgqfakevlpkyfkhnnmaSfVRQlNmygfrkvvhieqgglvkpddtefqhpcflrgqeqllenikRkv > 7dct_F interface=55,58,59,61,91, hvpafltklwtlvsdpdtdalicwspsgnsfhvfdqgqfakevlpkyfkhnnmaSfvRQlNmygfrkvvdtefqhpcflrgqeqllenikRkv
interface signature	SVRQNR/SVRQNR/SRQNR

Estimated binding specificities ?

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# IC=13.360 IC/col=1.028 n_of_columns=13

specificity:

A |   3   0   4  96   0  87  66   1  70   0   3   0   3
C |   3  96   0   0   0   3  12  81   3   5   3  96   0
G |   3   0   0   0  96   3   7   0  11   7   0   0  92
T |  87   0  92   0   0   3  11  14  12  84  90   0   1

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updated Sun Dec 15 04:17:03 2024