7dct_DEF : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF HSF1 DNA-BINDING DOMAIN IN COMPLEX WITH 3-SITE HSE DNA (24 BP)
reference	Feng et al. Iscience 24 102951 2021
source	HOMO SAPIENS
experiment	X-ray (resolution=2.36, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	5hdn_C
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7dct_D interface=56,58,59,60,62,95, hhvpafltklwtlvsdpdtdalicwspsgnsfhvfdqgqfakevlpkyfkhnnmaSfVRQlNmygfrkvvhiddtefqhpcflrgqeqllenikRkv > 7dct_E interface=54,56,57,58,60,101, vpafltklwtlvsdpdtdalicwspsgnsfhvfdqgqfakevlpkyfkhnnmaSfVRQlNmygfrkvvhieqgglvkpddtefqhpcflrgqeqllenikRkv > 7dct_F interface=55,58,59,61,91, hvpafltklwtlvsdpdtdalicwspsgnsfhvfdqgqfakevlpkyfkhnnmaSfvRQlNmygfrkvvdtefqhpcflrgqeqllenikRkv
interface signature	SVRQNR/SVRQNR/SRQNR

Estimated binding specificities ?

readout + contact

# IC=13.318 IC/col=1.024 n_of_columns=13

specificity:

A |   3   0   3  96   0  84  64   0  71   2   3   0   3
C |   3  96   1   0   0   3  14  84   3   3   3  96   0
G |   3   0   0   0  96   3   7   1  11   7   0   0  93
T |  87   0  92   0   0   6  11  11  11  84  90   0   0

scan!

home
updated Wed Sep 11 04:03:29 2024