7dcu_ABC : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF HSF2 DNA-BINDING DOMAIN IN COMPLEX WITH 3-SITE HSE DNA (21 BP)
reference	Feng et al. Iscience 24 102951 2021
source	HOMO SAPIENS
experiment	X-ray (resolution=1.75, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	7dci_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7dcu_A interface=60,62,63,64,66,67,98,101, hhhhhhvpaflsklwtlveethtnefitwsqngqsflvldeqrfakeilpkyfkhnnmaSfVRQlNMygfrkvvdgpvefqhpyfkqgqddllenikRkvS > 7dcu_B interface=54,56,57,58,60,99,102, vpaflsklwtlveethtnefitwsqngqsflvldeqrfakeilpkyfkhnnmaSfVRQlNmygfrkvvhidsgirdgpvefqhpyfkqgqddllenikRkvS > 7dcu_C interface=54,57,58,90, vpaflsklwtlveethtnefitwsqngqsflvldeqrfakeilpkyfkhnnmaSfvRQlnmygfrkvvpvefqhpyfkqgqddllenikRkv
interface signature	SVRQNMRS/SVRQNRS/SRQR

Estimated binding specificities ?

readout + contact

# IC=15.767 IC/col=1.051 n_of_columns=15

specificity:

A |   0   3   3   0   0  96   0  86  69  30  92   7   1   0   0
C |   0   7   0  96   0   0   0   3  11   6   0  11   0  96   0
G |  96  10   3   0   0   0  96   7   9   3   3   6   3   0  96
T |   0  76  90   0  96   0   0   0   7  57   1  72  92   0   0

scan!

home
updated Sun Dec 15 04:17:24 2024