7dcu_ABC : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF HSF2 DNA-BINDING DOMAIN IN COMPLEX WITH 3-SITE HSE DNA (21 BP)
reference	Feng et al. Iscience 24 102951 2021
source	HOMO SAPIENS
experiment	X-ray (resolution=1.75, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	7dci_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7dcu_A interface=60,62,63,64,66,67,98,101, hhhhhhvpaflsklwtlveethtnefitwsqngqsflvldeqrfakeilpkyfkhnnmaSfVRQlNMygfrkvvdgpvefqhpyfkqgqddllenikRkvS > 7dcu_B interface=54,56,57,58,60,99,102, vpaflsklwtlveethtnefitwsqngqsflvldeqrfakeilpkyfkhnnmaSfVRQlNmygfrkvvhidsgirdgpvefqhpyfkqgqddllenikRkvS > 7dcu_C interface=54,57,58,90, vpaflsklwtlveethtnefitwsqngqsflvldeqrfakeilpkyfkhnnmaSfvRQlnmygfrkvvpvefqhpyfkqgqddllenikRkv
interface signature	SVRQNMRS/SVRQNRS/SRQR

Estimated binding specificities ?

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# IC=16.137 IC/col=1.076 n_of_columns=15

specificity:

A |   0   0  88  79   5  60   7   0   0   0  96   0  80  80   0
C |  96   0   0   7   3   3   7   0  96   0   0   0   7   3  96
G |   0  96   7   7   0   3   3   0   0   0   0  96   3   6   0
T |   0   0   1   3  88  30  79  96   0  96   0   0   6   7   0

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updated Wed Sep 11 04:03:42 2024