7ea8_A : 3D-footprint complex

Interface of input file ?

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	HUMAN SETD2 BOUND TO A NUCLEOSOME CONTAINING ONCOHISTONE MUTATIONS
experiment	NMR
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4;
multimeric complexes	7ea8_ABCDEFGH
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7ea8_A interface=8,51, ggvmkphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqsaaigalqeaseaylvglfedtnlcaihakrvtimpkdiqlarrirge

  
  --RG--------RG----                               +-----------------------------6iy2_A    
                                                 +-4 
  --RT--RG----------                           +-5 +-----------------------------6pww_K    
                                               ! ! 
  --RG--------RT----                         +-6 +-----------------------------7zs9_e    
                                             ! ! 
  --RG--------------                       +-7 +-----------------------------5z3u_A    
                                           ! ! 
  HARA----LT--RC----                     +-8 +-----------------------------3kwq_E    
                                         ! ! 
  --RT----LA--RG----                   +-9 +-----------------------------7unc_a    
                                       ! ! 
  HGRGYG--QC--RG----                +-10 +-----------------------------7y7i_E    
                                    !  !  
  HARAYT--LT--RC----             +-11  +-----------------------------4xzq_E    
                                 !  !  
  --RCYA------RG----          +-12  +-----------------------------7ccr_A    
                              !  !  
  --------LT--------       +-13  +-----------------------------7ywx_E    
                           !  !  
  --------EA----RG--       !  +-----------------------------7n8n_A    
                           !  
  ------------RC----     -14                            +7xyf_B    
                           !            +---------------1 
  ----------------KG       !        +---2               +7nkx_f    
                           !        !   ! 
  ------------RT----       +--------3   +----------------7kbd_C    
                                    ! 
  ----------IT------                +--------------------3wkj_D

home
updated Sat Sep 14 02:25:44 2024