Interface of input file ?

interface graph
legend  pdf

footprint
legend

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.


Dendrogram of similar interfaces ?

matrix format
structure nameHUMAN SETD2 BOUND TO A NUCLEOSOME CONTAINING ONCOHISTONE MUTATIONS
experimentNMR
structural superfamilyHistone-fold;
sequence familyCore histone H2A/H2B/H3/H4;
multimeric complexes7ea8_ABCDEFGH
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
  
  HTRG----RT                   +-----------------------8g57_E    
                               !  
  --RGYALCRT                   !        +------------------8byq_e    
                               !        ! 
  --RA--LTRC                   !      +-5           +------6jm9_A    
                               !      ! !   +-------2 
  --------RA                +-11      ! !   !       !   +--7xsx_a    
                            !  !      ! +---4       +---1 
  --------RC                !  !    +-7     !           +--6qld_f    
                            !  !    ! !     ! 
  --RT----RG                !  !    ! !     +--------------7uv9_E    
                            !  !  +-8 ! 
  ------LT--             +-12  !  ! ! +--------------------7ywx_E    
                         !  !  +-10 ! 
  --RG----RG             !  !     ! +---------------------7yqk_E    
                         !  !     !  
  --RG----RT             !  !     +-----------------------8cww_A    
                         !  !  
  HARA--LTRC          +-13  +--------------------------3kwq_E    
                      !  !  
  --RG--LC--          !  !                 +---------8bvw_e    
                      !  !       +---------3 
  --------RT          !  !    +--6         +---------7lyb_G    
                   +-14  !    !  ! 
  --RT--LARG       !  !  +----9  +-------------------7unc_a    
                   !  !       ! 
  --RG------     -15  !       +----------------------6a5l_e    
                   !  !  
  --RA------       !  +-----------------------------6kxv_A    
                   !  
  --------RA       +-----------------------------1kx5_G    
                 

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updated Tue Dec 19 18:09:02 2023