7et4_ADGJ : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF ARABIDOPSIS TEM1 AP2 DOMAIN
reference	Hu et al. Proc.Natl.Acad.Sci.USA 118 ? 2021
source	Arabidopsis thaliana
experiment	X-ray (resolution=2.70, R-factor=?)
structural superfamily	DNA-binding domain;
reference complex	7et4_D
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7et4_A interface=14,15,22,24,27,29,31, rklpsskykgvvpQPngrwgaQiYekHqRvWlgtfneeeeaassydiavrrfrgrdavtnfksqvdgndaesafldahskaeivdmlrkhtyadefeqsrrk > 7et4_D interface=13,14,21,23,26,28,30, klpsskykgvvpQPngrwgaQiYekHqRvWlgtfneeeeaassydiavrrfrgrdavtnfksqvdgndaesafldahskaeivdmlrkhtyadefeqsrrkfvn > 7et4_G interface=13,14,21,23,28,30, klpsskykgvvpQPngrwgaQiYekhqRvWlgtfneeeeaassydiavrrfrgrdavtnfksqvdgndaesafldahskaeivdmlrkhtyadefeqsr > 7et4_J interface=12,13,20,22,27,29, lpsskykgvvpQPngrwgaQiYekhqRvWlgtfneeeeaassydiavrrfrgrdavtnfksqvdgndaesafldahskaeivdmlrkhtyadefeqsrrkf
interface signature	QPQYHRW/QPQYHRW/QPQYRW/QPQYRW

Estimated binding specificities ?

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# IC=33.424 IC/col=0.857 n_of_columns=39

specificity:

A |  90   0  69   0  96   0  96  24  24  24   0  96  92   0  96   0  69  24  24  24  24  24  24  93   0   1   0  96   0  69  24  10   9   0  96  96   0  96   0
C |   1  96   9  96   0   0   0  24  24  24  96   0   0  96   0  96   9  24  24  24  24  24  24   1  96   0  96   0   0   9  24   7   9  96   0   0  96   0  86
G |   4   0   9   0   0  96   0  24  24  24   0   0   3   0   0   0   9  24  24  24  24  24  24   1   0   0   0   0  96   9  24  72   9   0   0   0   0   0   1
T |   1   0   9   0   0   0   0  24  24  24   0   0   1   0   0   0   9  24  24  24  24  24  24   1   0  95   0   0   0   9  24   7  69   0   0   0   0   0   9

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updated Sun Dec 17 03:21:31 2023