7jnp_AB : 3D-footprint complex

structure name	MTRR BOUND TO THE RPOH OPERATOR FROM NEISSERIA GONORRHOEAE
reference	Brennan et al. 'Nucleic 49 4155 2021
source	NEISSERIA GONORRHOEAE
experiment	X-ray (resolution=2.60, R-factor=?)
structural superfamily	Homeodomain-like;Tetracyclin repressor-like, C-terminal domain;
reference complex	7jnp_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7jnp_A interface=36,37,41,42, alktkehlmlaaletfyrkgiartslneiaqaagvTRgalYWhfknkedlfdalfqricddienciaqdaadaeggswtvfrhtllhfferlqsndihykfhnilflkcehteqnaaviaiarkhqaiwrekitavlteavenqdladdldketavifikstldgliwrwfssgesfdlgktapriigimmdnlenhpclrr > 7jnp_B interface=35,36,40,41, lktkehlmlaaletfyrkgiartslneiaqaagvTRgalYWhfknkedlfdalfqricddienciaqdaadaeggswtvfrhtllhfferlqsndihykfhnilflkcehteqnaaviaiarkhqaiwrekitavlteavenqdladdldketavifikstldgliwrwfssgesfdlgktapriigimmdnlenhpclrr
interface signature	TRYW/TRYW

Estimated binding specificities ?

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# IC=9.567 IC/col=0.531 n_of_columns=18

specificity:

A |  92  12  24  24  92   0  88  24  24  24  24   0   0   4  24  24   4   4
C |   4  60  24  24   4  96   4  24  24  24  24  88   0   0  24  24  16   4
G |   0  16  24  24   0   0   0  24  24  24  24   4  96   4  24  24  60   4
T |   0   8  24  24   0   0   4  24  24  24  24   4   0  88  24  24  16  84

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updated Wed Sep 11 06:12:24 2024