7jnp_AB : 3D-footprint complex

structure name	MTRR BOUND TO THE RPOH OPERATOR FROM NEISSERIA GONORRHOEAE
reference	Brennan et al. 'Nucleic 49 4155 2021
source	NEISSERIA GONORRHOEAE
experiment	X-ray (resolution=2.60, R-factor=?)
structural superfamily	Homeodomain-like;Tetracyclin repressor-like, C-terminal domain;
reference complex	7jnp_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7jnp_A interface=36,37,41,42, alktkehlmlaaletfyrkgiartslneiaqaagvTRgalYWhfknkedlfdalfqricddienciaqdaadaeggswtvfrhtllhfferlqsndihykfhnilflkcehteqnaaviaiarkhqaiwrekitavlteavenqdladdldketavifikstldgliwrwfssgesfdlgktapriigimmdnlenhpclrr > 7jnp_B interface=35,36,40,41, lktkehlmlaaletfyrkgiartslneiaqaagvTRgalYWhfknkedlfdalfqricddienciaqdaadaeggswtvfrhtllhfferlqsndihykfhnilflkcehteqnaaviaiarkhqaiwrekitavlteavenqdladdldketavifikstldgliwrwfssgesfdlgktapriigimmdnlenhpclrr
interface signature	TRYW/TRYW

Estimated binding specificities ?

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# IC=9.486 IC/col=0.527 n_of_columns=18

specificity:

A |  86  15  24  24  86   0   4  24  24  24  24   0   0   3  24  24  14   3
C |   3  66  24  24   3  96   3  24  24  24  24   0   0   3  24  24  15   4
G |   3  12  24  24   3   0  86  24  24  24  24   0  96   0  24  24  58   3
T |   4   3  24  24   4   0   3  24  24  24  24  96   0  90  24  24   9  86

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updated Thu Jul 31 12:24:24 2025