7jnp_AB : 3D-footprint complex

structure name	MTRR BOUND TO THE RPOH OPERATOR FROM NEISSERIA GONORRHOEAE
reference	Brennan et al. 'Nucleic 49 4155 2021
source	NEISSERIA GONORRHOEAE
experiment	X-ray (resolution=2.60, R-factor=?)
structural superfamily	Homeodomain-like;Tetracyclin repressor-like, C-terminal domain;
reference complex	7jnp_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7jnp_A interface=36,37,41,42, alktkehlmlaaletfyrkgiartslneiaqaagvTRgalYWhfknkedlfdalfqricddienciaqdaadaeggswtvfrhtllhfferlqsndihykfhnilflkcehteqnaaviaiarkhqaiwrekitavlteavenqdladdldketavifikstldgliwrwfssgesfdlgktapriigimmdnlenhpclrr > 7jnp_B interface=35,36,40,41, lktkehlmlaaletfyrkgiartslneiaqaagvTRgalYWhfknkedlfdalfqricddienciaqdaadaeggswtvfrhtllhfferlqsndihykfhnilflkcehteqnaaviaiarkhqaiwrekitavlteavenqdladdldketavifikstldgliwrwfssgesfdlgktapriigimmdnlenhpclrr
interface signature	TRYW/TRYW

Estimated binding specificities ?

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# IC=9.775 IC/col=0.543 n_of_columns=18

specificity:

A |  90  15  24  24  87   0  90  24  24  24  24   2   0   2  24  24   2   2
C |   2  62  24  24   5  96   2  24  24  24  24  90   0   2  24  24  13   2
G |   2   8  24  24   2   0   0  24  24  24  24   2  96   2  24  24  67   2
T |   2  11  24  24   2   0   4  24  24  24  24   2   0  90  24  24  14  90

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updated Sun Dec 15 06:34:38 2024