interface graph thumbnail
legend  pdf

structure nameSTRUCTURE OF A 12 BASE PAIR RECA-D LOOP COMPLEX
referenceNature 586 801 2020 C10 H16 N5 O12 P3 S
sourceEscherichia coli
experimentX-ray (resolution=2.90, R-factor=?)
structural superfamilyP-loop containing nucleoside triphosphate hydrolases;RecA protein, C-terminal domain;
reference complex8trg_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureMRKI/SMRI

Estimated binding specificities ?

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# IC=6.633 IC/col=0.829 n_of_columns=8 specificity:   
A |  67  24   0   0   9   0   0   9
C |   9  24   0   0  67   0   0   9
G |   9  24   0  96   9  96   0  67
T |  11  24  96   0  11   0  96  11
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updated Wed Jan 7 01:10:59 2026