7kuf_AB : 3D-footprint complex

structure name	TRANSCRIPTION ACTIVATION SUBCOMPLEX WITH WHIB7 BOUND TO SIGMAAR4-RNAP BETA FLAP TIP CHIMERA AND DNA
reference	Beltran et al. Mol.Cell 81 2887 2021
source	MYCOBACTERIUM TUBERCULOSIS
experiment	X-ray (resolution=2.60, R-factor=?)
structural superfamily	Sigma3 and sigma4 domains of RNA polymerase sigma factors;
reference complex	7kuf_A 8cyf_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7kuf_A interface=68,70, pvlpchvgdpdlwfadtpaglevaktlcvscpirrqclaaalqraepwgvwggeifdqgsivshkrpRgRprk > 7kuf_B interface=45,46,47,48,50,51, llqdqlqsvldtlsereagvvrlrfgltdgqprtldeigqvygvTRERiRQiesktmsklrhpsrsqvlrdgtpeerllraifge
interface signature	RR/TRERRQ

Estimated binding specificities ?

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# IC=10.580 IC/col=0.814 n_of_columns=13

specificity:

A |  56  96  82  65   0  24  24   6   0   0   0  13   0
C |  13   0   6  13   0  24  24   4   0   0   0   8   0
G |  13   0   4  10   0  24  24  82   0   0  96  13  96
T |  14   0   4   8  96  24  24   4  96  96   0  62   0

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updated Wed Sep 11 07:10:52 2024