7lcc_A : 3D-footprint complex

structure name	HELITRON TRANSPOSASE BOUND TO LTS (HELRAISER K1068Q)
source	SYNTHETIC CONSTRUCT
experiment	NMR
structural superfamily	P-loop containing nucleoside triphosphate hydrolases;
sequence family	Eukaryotic protein of unknown function DUF8;
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7lcc_A interface=335,367,368,376,383,739,740,742,980,987,996,1020,1059,1060,1160,1210,1229,1230,1277,1284,1301,1320,1321, edailehscggmtvrcefclslnfsdekpsdgkftrccskgkvcpndihfpdypaylkrlmtnedsdsknfmenirsinssfafasmganiaspsgygpycfrihgqvyhrtgtlhpsdgvsrkfaqlyildtaeatskrlampenqgcserlmininnlmheineltksykmlhevekeaqseaaakgiaptevtmaikydrnsdpgrynsprvtevavifrnedgeppferdllihckpdpnnpnatkmkqisilfptldamtypilfphgekgwgtdialrrvtqmqyygfhlsvrdtfnpilnagkltqqfivdsyskmeanrinfikanQsklrvekysglmdylksrsendnvpigkmiiLPssfegspRnmqqryQdamaivtkygkpdlfitmtcnpkwaditnnlqrwqkvenrpdlvarvfniklnallndickfhlfgkviakihviefqkrglphahillildsesklrseddidrivkaeipdedqcprlfqivksnmvhgpcgiqnpnspcmengkcskgypkefqnatignidgypkykrrsgstmsignkvvdntwivpynpylclkynchinvevcasiksvkylfkyiykghdcaniqisekniinhdevqdfidsryvsapeavwrlfamrmhdqshaitrlaihlpndqnlyfhtddfaevldrakrhnstlmawfllnredsdarnyyyweipqhyvfnnslwtkrrkggnkvlgrlFTvSfreperyylrllllhvkgaisfedlrtvggvtydtfheaakhrglllddtiwkdtiddaiilnmpkqlrqlfayicvfgcpsaadklwdenkshfiedfcwklhrregacvncemhalneiqevftlhgmkcshfklpdypllmnantcdqlyeqqqaevlinslndeqlaafqtitsaiedqtvhpkcffldgpggsgqtylykvlthyirgrggtvlptastgiaanlllggrtfHsqyklpIplnetsisRldiksevaktikkaqlliidectMasshainaidrllreimnlnvafggkvlllggdfrqclSIvphamrsaivqtslkycnvwgcfrklslktnmrsedsaysewlvklgdgkldssfhlgmdiieiphemicngsiieatfgnsisidnikniskrailcpKnehvqklneeildildgdfhtylsddsidstddaekenfpieflnsitpSgmpchklklkvgaiimllRNlnskwglcngtrfiikrlrpniieaevltgsaegevvlipridlspSdtglpfKlirrqfpvmpafamtiNksqgqtldrvgiflpepvFAhgqlyvafsrvrracdvkvkvvntssqgklvkhsesvftlnvvyreil
interface signature	QLPRQFTSHIRMSIKSRNSKNFA

Estimated binding specificities ?

contact

# IC=13.161 IC/col=1.196 n_of_columns=11

specificity:

A |   0   0   0  74   0  96   0  74  96   0  96
C |  96  96   0   7   0   0   0   7   0   0   0
G |   0   0   0   7   0   0   0   8   0   0   0
T |   0   0  96   8  96   0  96   7   0  96   0

scan!

Dendrogram of similar interfaces ?

matrix format

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updated Wed Dec 18 09:36:19 2024