7mi5_ABCDEF : 3D-footprint complex

structure name	ASYMMETRICAL PAM-NON PAM PRESPACER BOUND CAS4/CAS1/CAS2 COMPLEX
source	GEOBACTER SULFURREDUCENS
experiment	NMR
reference complex	7mi4_C
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7mi5_A interface=229, gsiplipvrmlnehvycprlaylmwvqgefshneftvdgvirhrrvdagggvlpsetqedsriharsvslsserlgitakidlvegegayvspvdykrgkrphvaggayepervqlcaqglllrehgfasdggalyfvasrervpvafddeligrtlaaidemgrtalsgtmpppledspkcprcslvgiclpdevrflshlsveprpiipadgrglplyvqspkayvRkdgdclvieeervrvaearlgetsqvalfgnatlttaalheclrreipvtwlsyggwfmghtvstghrnvetrtyqyqrsfdpetclnlarrwivakiancrtllrrnwrgegdeakappgllmslqddmrhamrapslevllgiegasagryfqhfsrmlrggdgegmgfdfttrnrrppkdpvnallsfayamltrewtvalaavgldpyrgfyhqprfgrpalaldmmepfrpliadstvlmainngeirtgdfvrsaggcnltdsarkrfiagferrmeqevthpifkytisyrrllevqarlltrylsgeipaypnfvt > 7mi5_B interface=12,27, grglplyvqspKayvrkdgdclvieeErvrvaearlgetsqvalfgnatlttaalheclrreipvtwlsyggwfmghtvstghrnvetrtyqyqrsfdpetclnlarrwivakiancrtllrrnwrgegdeakappgllmslqddmrhamrapslevllgiegasagryfqhfsrmlrggdgegmgfdfttrnrrppkdpvnallsfayamltrewtvalaavgldpyrgfyhqprfgrpalaldmmepfrpliadstvlmainngeirtgdfvrsaggcnltdsarkrfiagferrmeqevthpifkytisyrrllevqarlltrylsgeipaypnfvt > 7mi5_C interface= lpdevrflshlSveprpiipadgrglPlyvqspkayvrkdgdclvieeervrvaearlgetsqvalfgnatlttaalheclrreipvtwlsyggwfmghtvstghrnvetrtyqyqrsfdpetclnlarrwivakiancrtllrrnwrgegdeakappgllmslqddmrhamrapslevllgiegasagryfqhfsrmlrggdgegmgfdfttrnrrppkdpvnallsfayamltrewtvalaavgldpyrgfyhqprfgrpalaldmmepfrpliadstvlmainngeirtgdfvrsaggcnltdsarkrfiagferrmeqevthpifkytisyrrllevqarlltrylsgeipaypnfvt > 7mi5_D interface=11,12,47, grglplyvqsPKayvrkdgdclvieeervrvaearlgetsqvalfgNatlttaalheclrreipvtwlsyggwfmghtvstghrnvetrtyqyqrsfdpetclnlarrwivakiancrtllrrnwrgegdeakappgllmslqddmrhamrapslevllgiegasagryfqhfsrmlrggdgegmgfdfttrnrrppkdpvnallsfayamltrewtvalaavgldpyrgfyhqprfgrpalaldmmepfrpliadstvlmainngeirtgdfvrsaggcnltdsarkrfiagferrmeqevthpifkytisyrrllevqarlltrylsgeipaypnfvt > 7mi5_E interface=17,18, mehlyivsydirnqrrWRrlfktmhgfgcwlqlsvfqcrldririikmeaaineivnhaedhvlildlgpaenvkpkvssigktfdpilrqaviv > 7mi5_F interface=14,17,18, mehlyivsydirnQrrWRrlfktmhgfgcwlqlsvfqcrldririikmeaaineivnhaedhvlildlgpaenvkpkvssigktfdpilrqaviv
interface signature	R/KE/SP/PKN/WR/QWR

Estimated binding specificities ?

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# IC=7.099 IC/col=0.338 n_of_columns=21

specificity:

A |   0  24  24  24  13  24  24  96  24  24  24  24   0  24  54   0  24  24  24  24   0
C |  96  24  24  24  13  24  24   0  24  24  24  24   0  24  13   0  24  24  24  24   0
G |   0  24  24  24  54  24  24   0  24  24  24  24   0  24  13  96  24  24  24  24  96
T |   0  24  24  24  16  24  24   0  24  24  24  24  96  24  16   0  24  24  24  24   0

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updated Sun Dec 15 08:43:25 2024