7mid_ABCD : 3D-footprint complex

structure name	SUB-COMPLEX OF CAS4-CAS1-CAS2 BOUND PAM CONTAINING DNA
source	GEOBACTER SULFURREDUCENS
experiment	NMR
structural superfamily	TTP0101/SSO1404-like;
reference complex	7mi4_C 7mid_D
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7mid_A interface= dgsiplipvrmlnehvycprlaylmwvqgefshneftvdgvirhrrvdagggvlpsetqedsriharsvslsserlgitakidlvegegayvspvdykrgkrphvaggayepervqlcaqglllrehgfasdggalyfvasrervpvafddeligrtlaaidemgrtalsgtmpppledspkcprcslvgiclpdevrflshlsveprpiipadgrglplyvqspkayvrkdgdclvieeervrvaearlgetsqvalfgnatlttaalheclrreipvtwlsyggwfmghtvstghrnvetrtyqyqrsfdpetclnlarrwivakiancrtllrrnwrgegdeakappgllmslqddmrhamrapslevllgiegasagryfqhfsrmlrggdgegmgfdfttrnrrppkdpvnallsfayamltrewtvalaavgldpyrgfyhqprfgrpalaldmmepfrpliadstvlmainngeirtgdfvrsaggcnltdsarkrfiagferrmeqevthpifkytisyrrllevqarlltrylsgeipaypnfvt > 7mid_B interface=11,12,47,70, grglplyvqsPKayvrkdgdclvieeervrvaearlgetsqvalfgNatlttaalheclrreipvtwlsYggwfmghtvstghrnvetrtyqyqrsfdpetclnlarrwivakiancrtllrrnwrgegdeakappgllmslqddmrhamrapslevllgiegasagryfqhfsrmlrggdgegmgfdfttrnrrppkdpvnallsfayamltrewtvalaavgldpyrgfyhqprfgrpalaldmmepfrpliadstvlmainngeirtgdfvrsaggcnltdsarkrfiagferrmeqevthpifkytisyrrllevqarlltrylsgeipaypnfvt > 7mid_C interface=14,17,18, mehlyivsydirnQrrWRrlfktmhgfgcwlqlsvfqcrldririikmeaaineivnhaedhvlildlgpaenvkpkvssigktfdpilrqaviv > 7mid_D interface=14,17,18, mehlyivsydirnQrrWRrlfktmhgfgcwlqlsvfqcrldririikmeaaineivnhaedhvlildlgpaenvkpkvssigktfdpilrq
interface signature	/PKNY/QWR/QWR

Estimated binding specificities ?

readout + contact

# IC=7.757 IC/col=0.485 n_of_columns=16

specificity:

A |   0  13  15  96  24  24  24  24   0  24  49   0  24  24   7   0
C |  96   7  11   0  24  24  24  24   0  24  15  96  24  24  13   0
G |   0  15  57   0  24  24  24  24   0  24  15   0  24  24  61  96
T |   0  61  13   0  24  24  24  24  96  24  17   0  24  24  15   0

scan!

home
updated Wed Jan 7 03:36:44 2026