interface graph thumbnail
legend  pdf

structure nameZBTB7A ZINC FINGER DOMAIN BOUND TO -200 SITE OF FETAL GLOBIN PROMOTER (OLIGO 6)
(Zinc finger and BTB domain-containing protein 7A)
referenceHorton et al. 'Cell 36 109759 2021
sourceHomo sapiens
experimentX-ray (resolution=2.86, R-factor=0.228)
structural superfamilybeta-beta-alpha zinc fingers;
sequence familyZinc finger, C2H2 type;
multimeric complexes7n5v_AB
redundant complexes7n5t
reference complex7n5w_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKRRDKRSDHR

Estimated binding specificities ?

readout + contactlogo
# IC=6.058 IC/col=0.606 n_of_columns=10 specificity:   
A |   3   3   6   6  35  25   6   4   0   6
C |   3   5   6   6  20  23   7   3   1   6
G |  87  69  77  78  22  25  63  84  95  76
T |   3  19   7   6  19  23  20   5   0   8
scan!

Dendrogram of similar interfaces ?

matrix format

home
updated Mon Dec 18 21:14:17 2023