7n8n_B : 3D-footprint complex

Interface of input file ?

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	MELBOURNEVIRUS NUCLEOSOME LIKE PARTICLE (HISTONE H2B-H2A DOUBLET)
source	MELBOURNEVIRUS
experiment	NMR
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4;
multimeric complexes	7n8n_ABCD
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7n8n_B interface=3,103, rkRdksvnfrlglrnmlaqihpdisvqtealselsniavflgkkishgavtllpegtktikssavllaagdlygkdlgrhavgemtkavtrygsakeskegsRsskaklqisvarserllrehggcsrvsegaavalaaaieyfmgevlelagnaardskkvrisvkhitlaiqndaalfavvgkgvfsgagvslisvpipr

  
  RT----             +-----------------------------9fgq_D    
                   +-1 
  --RG--         +-2 +-----------------------------8txv_G    
                 ! ! 
  --RT--       +-3 +-----------------------------8u14_G    
               ! ! 
  --RGRG     --4 +-----------------------------8kcb_A    
               ! 
  --RT--       +-----------------------------8smw_G

home
updated Sat Sep 14 03:19:40 2024