7n8n_B : 3D-footprint complex

Interface of input file ?

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	MELBOURNEVIRUS NUCLEOSOME LIKE PARTICLE (HISTONE H2B-H2A DOUBLET)
source	MELBOURNEVIRUS
experiment	NMR
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4;
multimeric complexes	7n8n_ABCD
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7n8n_B interface=3,103, rkRdksvnfrlglrnmlaqihpdisvqtealselsniavflgkkishgavtllpegtktikssavllaagdlygkdlgrhavgemtkavtrygsakeskegsRsskaklqisvarserllrehggcsrvsegaavalaaaieyfmgevlelagnaardskkvrisvkhitlaiqndaalfavvgkgvfsgagvslisvpipr

  
  ----RA--                                    +1zla_C    
                               +--------------2 
  ----RG--                     !              +8ox0_C    
                        +------4 
  ----RARA              !      !              +6a5l_g    
                      +-6      +--------------1 
  ----RG--            ! !                     +8txv_G    
                    +-8 ! 
  ----RG--          ! ! +---------------------5x0y_G    
                 +-10 ! 
  ----RG--       !  ! +-----------------------8jla_C    
                 !  !  
  --RA----       !  +-------------------------6g0l_D    
                 !  
  RT------     -11        +------------------9fgq_D    
                 !    +---5 
  ----RGRG       !    !   !          +-------8kcb_A    
                 !  +-7   +----------3 
  ----RT--       !  ! !              +-------8hr1_E    
                 +--9 ! 
  ----RT--          ! +----------------------8smw_G    
                    ! 
  ----RT--          +------------------------8u14_G

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updated Sun Aug 3 17:12:51 2025