7npf_ABCDEFGH : 3D-footprint complex

structure name	VIBRIO CHOLERAE PARA2-ATPYS-DNA FILAMENT
source	VIBRIO CHOLERAE
experiment	NMR
structural superfamily	P-loop containing nucleoside triphosphate hydrolases;
reference complex	7npf_H
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7npf_A interface= kreqtienlyqlaqltqqvqadrieivleerrdehfppmskalmetrsgltrrkldeaiakmeeaghqftknnanhysislseahmlmdaagvpkfherkknnenkpwiinvqnqkggtgksmtavhlaaclalnldkryriclidldpqgslrlflnpqislaehtniysavdimldnvpdgvqvdteflrknvmlptqypnlktisafpedamfnaeawqylsqnqsldivrllkeklidkiasdfdiimidtgphvdplvwnamyasnallipcaakrldwastvnffqhlptvyemfpedwkglefvrlmptmfeddnkkqvsvltemnyllgdqvmmatiprsrafetcadtystvfdltvndfeggkktlataqdavqksalelervlhshwsslnqg > 7npf_B interface=75,76, kreqtienlyqlaqltqqvqadrieivleerrdehfppmskalmetrsgltrrkldeaiakmeeaghqftknnaNHysislseahmlmdaagvpkfherkknnenkpwiinvqnqkggtgksmtavhlaaclalnldkryriclidldpqgslrlflnpqislaehtniysavdimldnvpdgvqvdteflrknvmlptqypnlktisafpedamfnaeawqylsqnqsldivrllkeklidkiasdfdiimidtgphvdplvwnamyasnallipcaakrldwastvnffqhlptvyemfpedwkglefvrlmptmfeddnkkqvsvltemnyllgdqvmmatiprsrafetcadtystvfdltvndfgkktlataqdavqksalelervlhshwsslnqg > 7npf_C interface=76, kreqtienlyqlaqltqqvqadrieivleerrdehfppmskalmetrsgltrrkldeaiakmeeaghqftknnanHysislseahmlmdaagvpkfherkknnenkpwiinvqnqkggtgksmtavhlaaclalnldkryriclidldpqgslrlflnpqislaehtniysavdimldnvpdgvqvdteflrknvmlptqypnlktisafpedamfnaeawqylsqnqsldivrllkeklidkiasdfdiimidtgphvdplvwnamyasnallipcaakrldwastvnffqhlptvyemfpedwkglefvrlmptmfeddnkkqvsvltemnyllgdqvmmatiprsrafetcadtystvfdltvndfeggkktlataqdavqksalelervlhshwsslnqg > 7npf_D interface=75,76, kreqtienlyqlaqltqqvqadrieivleerrdehfppmskalmetrsgltrrkldeaiakmeeaghqftknnaNHysislseahmlmdaagvpkfherkknnenkpwiinvqnqkggtgksmtavhlaaclalnldkryriclidldpqgslrlflnpqislaehtniysavdimldnvpdgvqvdteflrknvmlptqypnlktisafpedamfnaeawqylsqnqsldivrllkeklidkiasdfdiimidtgphvdplvwnamyasnallipcaakrldwastvnffqhlptvyemfpedwkglefvrlmptmfeddnkkqvsvltemnyllgdqvmmatiprsrafetcadtystvfdltvndfgkktlataqdavqksalelervlhshwsslnqg > 7npf_E interface=76, kreqtienlyqlaqltqqvqadrieivleerrdehfppmskalmetrsgltrrkldeaiakmeeaghqftknnanHysislseahmlmdaagvpkfherkknnenkpwiinvqnqkggtgksmtavhlaaclalnldkryriclidldpqgslrlflnpqislaehtniysavdimldnvpdgvqvdteflrknvmlptqypnlktisafpedamfnaeawqylsqnqsldivrllkeklidkiasdfdiimidtgphvdplvwnamyasnallipcaakrldwastvnffqhlptvyemfpedwkglefvrlmptmfeddnkkqvsvltemnyllgdqvmmatiprsrafetcadtystvfdltvndfeggkktlataqdavqksalelervlhshwsslnqg > 7npf_F interface=75,76, kreqtienlyqlaqltqqvqadrieivleerrdehfppmskalmetrsgltrrkldeaiakmeeaghqftknnaNHysislseahmlmdaagvpkfherkknnenkpwiinvqnqkggtgksmtavhlaaclalnldkryriclidldpqgslrlflnpqislaehtniysavdimldnvpdgvqvdteflrknvmlptqypnlktisafpedamfnaeawqylsqnqsldivrllkeklidkiasdfdiimidtgphvdplvwnamyasnallipcaakrldwastvnffqhlptvyemfpedwkglefvrlmptmfeddnkkqvsvltemnyllgdqvmmatiprsrafetcadtystvfdltvndfgkktlataqdavqksalelervlhshwsslnqg > 7npf_G interface=76, kreqtienlyqlaqltqqvqadrieivleerrdehfppmskalmetrsgltrrkldeaiakmeeaghqftknnanHysislseahmlmdaagvpkfherkknnenkpwiinvqnqkggtgksmtavhlaaclalnldkryriclidldpqgslrlflnpqislaehtniysavdimldnvpdgvqvdteflrknvmlptqypnlktisafpedamfnaeawqylsqnqsldivrllkeklidkiasdfdiimidtgphvdplvwnamyasnallipcaakrldwastvnffqhlptvyemfpedwkglefvrlmptmfeddnkkqvsvltemnyllgdqvmmatiprsrafetcadtystvfdltvndfeggkktlataqdavqksalelervlhshwsslnqg > 7npf_H interface=75,76, kreqtienlyqlaqltqqvqadrieivleerrdehfppmskalmetrsgltrrkldeaiakmeeaghqftknnaNHysislseahmlmdaagvpkfherkknnenkpwiinvqnqkggtgksmtavhlaaclalnldkryriclidldpqgslrlflnpqislaehtniysavdimldnvpdgvqvdteflrknvmlptqypnlktisafpedamfnaeawqylsqnqsldivrllkeklidkiasdfdiimidtgphvdplvwnamyasnallipcaakrldwastvnffqhlptvyemfpedwkglefvrlmptmfeddnkkqvsvltemnyllgdqvmmatiprsrafetcadtystvfdltvndfgkktlataqdavqksalelervlhshwsslnqg
interface signature	/NH/H/NH/H/NH/H/NH

Estimated binding specificities ?

contact

# IC=14.453 IC/col=0.371 n_of_columns=39

specificity:

A |   1   0  11  24  24  24  24  16   0   4  24  24  24  24  24   1   0   1  24  24  24  24  24   0   1  24  24  24  24  24  11   0  24  24  24  24  24  24   1
C |   1   0  13  24  24  24  24   5   0   1  24  24  24  24  24   1   0   4  24  24  24  24  24   0   0  24  24  24  24  24  15   0  24  24  24  24  24  24   4
G |   4   0  11  24  24  24  24   1   0   1  24  24  24  24  24   4   0   1  24  24  24  24  24   0   3  24  24  24  24  24  11   0  24  24  24  24  24  24   1
T |  90  96  61  24  24  24  24  74  96  90  24  24  24  24  24  90  96  90  24  24  24  24  24  96  92  24  24  24  24  24  59  96  24  24  24  24  24  24  90

scan!

home
updated Fri Jun 26 14:51:02 2026