7nyz_IJ : 3D-footprint complex

structure name	CRYO-EM STRUCTURE OF THE MUKBEF-MATP-DNA MONOMER (PARTIALLY OPEN CONFORMATION)
source	PHOTORHABDUS THRACENSIS
experiment	NMR
structural superfamily	P-loop containing nucleoside triphosphate hydrolases;MukF C-terminal domain-like;
reference complex	7nyw_B 7nyw_C 7nyw_F 7nyw_J
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7nyz_I interface=72,73,75,76,79,80,93,95, mkyqqlenlecgwkwaylirkhqegepitkyiensaahaavdkliklesepvrvlewieqhmnpdlfnrmkQTiRArrKRhfnaehqhtrkkSiDldfpvwhrlsalsqrrgntlsetivqliedaerkekyan > 7nyz_J interface=72,73,75,76,79,80,93, mkyqqlenlecgwkwaylirkhqegepitkyiensaahaavdkliklesepvrvlewieqhmnpdlfnrmkQTiRArrKRhfnaehqhtrkkSidldfpvwhrlsalsqrrgntlsetivqliedaerkekyanq
interface signature	QTRAKRSD/QTRAKRS

Estimated binding specificities ?

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# IC=14.673 IC/col=0.978 n_of_columns=15

specificity:

A |   2   0   2   2  87   0  96  24   2   0  13  88  67  90   0
C |   2   0   2   5   2  96   0  24   2   0   5   2   7   5   0
G |   4  96   2   2   2   0   0  24   2  96  10   4  10   1  96
T |  88   0  90  87   5   0   0  24  90   0  68   2  12   0   0

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updated Sun Dec 15 10:44:58 2024