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interface graphfootprint logointerface matrixatomic interactionsinterface residue numbers

3D-footprint cannot reliably estimate the specificity of 'Nucleic acid-binding proteins', as they bind to single-stranded DNA and thus accumulate more base contacts.

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updated Sat Jan 10 16:03:50 2026

structure name	STRUCTURAL INVESTIGATIONS OF A NEW L3 DNA LIGASE: STRUCTURE-FUNCTION ANALYSIS (DNA ligase)
reference	Leiros et al. 'Sci 11 18693 2021
source	Burkholderia pseudomallei
experiment	X-ray (resolution=2.45, R-factor=0.259)
structural superfamily	DNA ligase/mRNA capping enzyme, catalytic domain;Nucleic acid-binding proteins;
sequence family	ATP dependent DNA ligase domain;
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7obn_A interface=85,213,252,289, tiptgfkpmlaatltkpelikfpvwaspkidgircvffggvaysrslkpipnpvvqefaaayasllegldgeltvgsptdancmQnsmavmskdftfhvfdwfplrdemgydrrseiverriadfyardikavpqhlcvcaedldtlearfladgyegmmirahsgtykcgrsteregglvkvkrfvdgeavivgfeeemrneneatrnatgRterstaqaglvgketlgalvvrrfeepygpvgpefnigTgftaaqrrdywqgrdgligrvvkfkhfdhgtvdaprHpvfigfrhpe