interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF C-TERMINALLY TRUNCATED BACILLUS SUBTILIS NUCLEOID OCCLUSION PROTEIN (NOC) COMPLEXED TO THE NOC-BINDING SITE (NBS)
(Nucleoid occlusion protein)
referenceJalal et al. 'To ? ? ?
sourceBacillus subtilis (strain 168) / Bacillus subtilis (strain 168)
experimentX-ray (resolution=2.90, R-factor=0.232)
structural superfamilyKorB DNA-binding domain-like;ParB/Sulfiredoxin;
sequence familyParBlike nuclease domain;
multimeric complexes7ol9_AB
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureQSTANRRRV

Estimated binding specificities ?

readout + contactlogo
# IC=7.552 IC/col=1.079 n_of_columns=7 specificity:   
A |  20   0   0  96  76  96   0
C |  19   0   0   0   0   0   0
G |  38  96  96   0  20   0   0
T |  19   0   0   0   0   0  96
scan!

Dendrogram of similar interfaces ?

matrix format



home

updated Wed Dec 18 10:07:09 2024