interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF A TRAPPED PAB-AGOG/DOUBLE-STANDED DNA COVALENT INTERMEDIATE (DNA CONTAINING ADENINE OPPOSITE TO LESION)
(N-glycosylaseDNA lyase)
referenceGoffinont et al. 'To ? ? ?
sourcePyrococcus abyssi
experimentX-ray (resolution=1.33, R-factor=0.175)
structural superfamilyDNA-glycosylase;
sequence familyDomain of unknown function DUF1886;
multimeric complexes7oue_EG
reference complex7p0w_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureYQRLQ

Estimated binding specificities ?

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# IC=3.240 IC/col=0.810 n_of_columns=4 specificity:   
A |  48  96  96  67
C |  16   0   0   9
G |  16   0   0  11
T |  16   0   0   9
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updated Fri Sep 13 05:40:10 2024