interface graph thumbnail
legend  pdf

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.


Dendrogram of similar interfaces ?

matrix format
structure nameSTRUCTURE OF THE HUMAN CCAN BOUND TO ALPHA SATELLITE DNA
(CENTROMERE PROTEIN W)
sourceHOMO SAPIENS
experimentNMR
structural superfamilyHistone-fold;
multimeric complexes7r5s_ILNTW 7ywx_ABCDEFGLNVW
redundant complexes7ywx
links to other resourcesNAKB PDBSum PDIdb DNAproDB
  
  --LCRT----             +-----------------------------8hr1_E    
                       +-7 
  ----RT----         +-8 +-----------------------------8grq_A    
                     ! ! 
  ----RA--RA       +-9 +-----------------------------6a5l_g    
                   ! ! 
  ----RG----       ! +-----------------------------5x0y_G    
                   !  
  ----RA----       !              +--------------1zla_C    
                 -10         +----4 
  ----RT----       !         !    !              +8u14_G    
                   !         !    +--------------1 
  ----RG----       !     +---5                   +8ox0_C    
                   !     !   ! 
  ----RG----       !     !   !                   +8txv_G    
                   +-----6   +-------------------3 
  ----RG----             !                       +8jla_C    
                         ! 
  RT--------             !                       +9fgq_D    
                         +-----------------------2 
  ------RA--                                     +6g0l_D    
                 

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updated Wed Dec 18 11:08:53 2024