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structure nameDNA-BINDING DOMAIN OF HUMAN SETMAR IN COMPLEX WITH HSMAR1 TERMINAL INVERTED REPEAT (TIR) DNA
(Histone-lysine N-methyltransferase SETMAR)
referenceGeorgiadis et al. J.Biol.Chem. 298 101894 2022
sourceHomo sapiens
experimentX-ray (resolution=2.37, R-factor=0.212)
structural superfamilyHomeodomain-like;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureERTQWRRTRNHSTVR

Estimated binding specificities ?

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# IC=19.058 IC/col=0.953 n_of_columns=20 specificity:   
A |   7   0   0   1  96  71  24   7  94   7  24   0   2   2   0   0  91   0   0  76
C |  78  96   0  93   0   9  24   7   0  71  24   0   4   4   0  96   2  96  96   4
G |   4   0  96   2   0  12  24   4   2   7  24   0   9   2  96   0   3   0   0   7
T |   7   0   0   0   0   4  24  78   0  11  24  96  81  88   0   0   0   0   0   9
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updated Wed Dec 18 11:13:41 2024