7s03_A : 3D-footprint complex

structure name	DNA-BINDING DOMAIN OF HUMAN SETMAR IN COMPLEX WITH HSMAR1 TERMINAL INVERTED REPEAT (TIR) DNA (Histone-lysine N-methyltransferase SETMAR)
reference	Georgiadis et al. J.Biol.Chem. 298 101894 2022
source	Homo sapiens
experiment	X-ray (resolution=2.37, R-factor=0.212)
structural superfamily	Homeodomain-like;
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7s03_A interface=41,42,43,45,46,63,66,87,88,97,98,99,100,102,103, kmmldkkqiraiflfefkmgrkaaettrnmnnafgpgtanERTvQWwfkkfrkgdesledeeRsgRpsevdndqlraiieadplttTRevaeemnvNHSTvVRhlkqi
interface signature	ERTQWRRTRNHSTVR

Estimated binding specificities ?

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# IC=18.998 IC/col=0.950 n_of_columns=20

specificity:

A |   7   0   0   0  96  65  24   7  93   4  24   0   2   2   0   0  91   0   0  76
C |  78  96   0  93   0  12  24   4   0  76  24   0   7   2   0  96   2  96  96   4
G |   4   0  96   3   0  12  24   7   2   9  24   0   6   4  96   0   3   0   0   7
T |   7   0   0   0   0   7  24  78   1   7  24  96  81  88   0   0   0   0   0   9

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updated Sat Sep 14 04:34:25 2024