7u1t_ABCD : 3D-footprint complex

Interface of input file ?

structure name	EBNA1 DNA BINDING DOMAIN (401-641) BINDS TO HALF DYAD SYMMETRY ELEMENT
experiment	NMR
structural superfamily	Viral DNA-binding domain;
reference complex	7u1t_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7u1t_A interface=23,27,28,32,40,78,81, paddpgegpstgprgqgdggrrKkggWFgkhRgqggsnpKfeniaeglrallarshverttdegtwvagvfvyggskTslYnlrrgtalaipqcrltplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmtkpaptcnirvtvcsfddgvdlppwfppm > 7u1t_B interface=2,8,11,12,16,24,61,62,65,66, gDggrrkKggWFgkhRgqggsnpKfeniaeglrallarshverttdegtwvagvfvyggsKTslYNlrrgtalaipqcrltplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmtkpaptcnirvtvcsfddgvdlppwfppmve > 7u1t_C interface=24,27,28,40,41,77,78,81,82,85, paddpgegpstgprgqgdggrrkKggWFgkhrgqggsnpKFeniaeglrallarshverttdegtwvagvfvyggsKTslYNlrRgtalaipqcrltplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmtkpaptcnirvtvcsfddgvdlppwfppm > 7u1t_D interface=8,9,12,13,15,17,25,26,62,63,66, qgdggrrKKggWFgKhRgqggsnpKFeniaeglrallarshverttdegtwvagvfvyggsKTslYnlrrgtalaipqcrltplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmtkpaptcnirvtvcsfddgvdlppwfppm
interface signature	KWFRKTY/DKWFRKKTYN/KWFKFKTYNR/KKWFKRKFKTY

Estimated binding specificities ?

readout + contact

# IC=37.518 IC/col=0.987 n_of_columns=38

specificity:

A |   1   9  96   0  87   1   0  96   1  78   1   1   0  96  24   0   0  24  24  24   0   0   0  90  96   0   1  96  24  24   1   4   0   0  96   1  24   1
C |  90   0   0   0   9   1  94   0   1   1   4   1   0   0  24  96  92  24  24  24   0   0   0   1   0   0  85   0  24  24   1   1  96   0   0   1  24   1
G |   4  87   0   0   0  94   1   0   1   7   1  93   0   0  24   0   3  24  24  24  96  96  96   1   0  96   1   0  24  24   1  90   0   0   0   1  24  93
T |   1   0   0  96   0   0   1   0  93  10  90   1  96   0  24   0   1  24  24  24   0   0   0   4   0   0   9   0  24  24  93   1   0  96   0  93  24   1

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updated Wed Jan 7 11:09:32 2026