Interface of input file ?

interface graph
legend  pdf

footprint
legend

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.


Dendrogram of similar interfaces ?

matrix format
structure nameARABIDOPSIS DDM1 BOUND TO NUCLEOSOME (H2A.W, H2B, H3.3, H4, WITH 147 BP DNA)
experimentNMR
structural superfamilyHistone-fold;
sequence familyCore histone H2A/H2B/H3/H4;
multimeric complexes8j92_ABCDEFGH
redundant complexes8j90 8j92 8kcc
links to other resourcesNAKB PDBSum PDIdb DNAproDB
  
  --RG----       +-----------------------------5x0y_G    
                 ! 
  --RA----       !                              +1zla_C    
                 !               +--------------1 
  --RG----       !           +---2              +8ox0_C    
                 !           !   ! 
  --RA--RA     --7       +---3   +--------------6a5l_g    
                 !       !   ! 
  ----RA--       !    +--4   +------------------6g0l_D    
                 !    !  ! 
  --RG----       !  +-5  +----------------------8jla_C    
                 !  ! ! 
  LCRT----       +--6 +-------------------------8hr1_E    
                    ! 
  --RT----          +--------------------------8grq_A    
               

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updated Sun Aug 3 20:39:45 2025