Interface of input file ?

interface graph
legend  pdf

footprint
legend

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.


Dendrogram of similar interfaces ?

matrix format
structure nameARABIDOPSIS DDM1 BOUND TO NUCLEOSOME (H2A.W, H2B, H3.3, H4, WITH 147 BP DNA)
experimentNMR
structural superfamilyHistone-fold;
sequence familyCore histone H2A/H2B/H3/H4;
multimeric complexes8j91_ABCDEFGH 8j92_ABCDEFGH 8whb_ABCDEFGH
redundant complexes8j92_H 8wh9_H 8j90 8j91 8wh5 8wh8 8wha 8whb
links to other resourcesNAKB PDBSum PDIdb DNAproDB 
  
  ------RT         +-----------------------------8u14_G    
                 +-3 
  ------RA       ! !            +----------------7xsx_a    
                 ! +------------2 
  ------RG     --4              !                +7e9c_G    
                 !              +----------------1 
  ------RG       !                               +8txv_G    
                 ! 
  RAAANA--       +-----------------------------1jfi_B

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updated Sat Sep 14 06:37:26 2024