7vn3_CD : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF MBP-FUSED BIL1/BZR1 (21-90) IN COMPLEX WITH DOUBLE-STRANDED DNA CONTANING CACACGTGTG
reference	Tanokura et al. Nat.Plants ? ? 2022
experiment	X-ray (resolution=1.94, R-factor=?)
structural superfamily	Periplasmic binding protein-like II;
reference complex	7vn3_C
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7vn3_C interface=372,378,382,385,386,389,390, mkieegklviwingdkgynglaevgkkfekdtgikvtvehpdkleekfpqvaatgdgpdiifwahdrfggyaqsgllaeitpaaafqdklypftwdavryngkliaypiavealsliynkdllpnppktweeipaldkelkakgksalmfnlqepyftwpliaadggyafkyaagkydikdvgvdnagakagltflvdliknkhmnadtdysiaeaafnkgetamtingpwawsnidtsavnygvtvlptfkgqpskpfvgvlsaginaaspnkelakeflenylltdegleavnkdkplgavalksyeeelakdpriaatmenaqkgeimpnipqmsafwyavrtavinaasgrqtvdaalaaaqtnaarRkpswrErenNrrRErrRRavaakiytglraqgdynlpkhcdnnevlkalcveagwvveedgttyr > 7vn3_D interface=371,377,381,384,385,388,389, kieegklviwingdkgynglaevgkkfekdtgikvtvehpdkleekfpqvaatgdgpdiifwahdrfggyaqsgllaeitpaaafqdklypftwdavryngkliaypiavealsliynkdllpnppktweeipaldkelkakgksalmfnlqepyftwpliaadggyafkyaagkydikdvgvdnagakagltflvdliknkhmnadtdysiaeaafnkgetamtingpwawsnidtsavnygvtvlptfkgqpskpfvgvlsaginaaspnkelakeflenylltdegleavnkdkplgavalksyeeelakdpriaatmenaqkgeimpnipqmsafwyavrtavinaasgrqtvdaalaaaqtnaarRkpswrErenNrrRErrRRavaakiytglraqgdynlpkhcdnnevlkalcveagwvveedgttyr
interface signature	RENRERR/RENRERR

Estimated binding specificities ?

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# IC=9.112 IC/col=0.828 n_of_columns=11

specificity:

A |   1  12   1  64   0   0   3   0  24  14  86
C |  92  56  92  18  96   0  14   3  24   1   3
G |   0   7   0   7   0  96  17  93  24  81   7
T |   3  21   3   7   0   0  62   0  24   0   0

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updated Wed Sep 11 15:18:05 2024