7vn4_CD : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF MBP-FUSED BIL1/BZR1 (21-90) IN COMPLEX WITH DOUBLE-STRANDED DNA CONTANING TCCACGTGGA
reference	Tanokura et al. Nat.Plants ? ? 2022
experiment	X-ray (resolution=2.10, R-factor=?)
structural superfamily	Periplasmic binding protein-like II;
reference complex	7vn3_C
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7vn4_C interface=372,382,385,386,389,390, mkieegklviwingdkgynglaevgkkfekdtgikvtvehpdkleekfpqvaatgdgpdiifwahdrfggyaqsgllaeitpaaafqdklypftwdavryngkliaypiavealsliynkdllpnppktweeipaldkelkakgksalmfnlqepyftwpliaadggyafkyaagkydikdvgvdnagakagltflvdliknkhmnadtdysiaeaafnkgetamtingpwawsnidtsavnygvtvlptfkgqpskpfvgvlsaginaaspnkelakeflenylltdegleavnkdkplgavalksyeeelakdpriaatmenaqkgeimpnipqmsafwyavrtavinaasgrqtvdaalaaaqtnaarRkpswrerenNrrRErrRRavaakiytglraqgdynlpkhcdnnevlkalcveagwvveedgttyr > 7vn4_D interface=372,382,385,386,389,390, mkieegklviwingdkgynglaevgkkfekdtgikvtvehpdkleekfpqvaatgdgpdiifwahdrfggyaqsgllaeitpaaafqdklypftwdavryngkliaypiavealsliynkdllpnppktweeipaldkelkakgksalmfnlqepyftwpliaadggyafkyaagkydikdvgvdnagakagltflvdliknkhmnadtdysiaeaafnkgetamtingpwawsnidtsavnygvtvlptfkgqpskpfvgvlsaginaaspnkelakeflenylltdegleavnkdkplgavalksyeeelakdpriaatmenaqkgeimpnipqmsafwyavrtavinaasgrqtvdaalaaaqtnaarRkpswrerenNrrRErrRRavaakiytglraqgdynlpkhcdnnevlkalcveagwvveedgttyr
interface signature	RNRERR/RNRERR

Estimated binding specificities ?

readout + contact

# IC=9.521 IC/col=0.952 n_of_columns=10

specificity:

A |   0   0   0  69   0   0  21   0   0  62
C |   0  82  96  26  96   0  13   0   0  13
G |  27   0   0   1   0  96  23  96  96   5
T |  69  14   0   0   0   0  39   0   0  16

scan!

home
updated Thu Jul 31 22:31:11 2025