7vp1_A : 3D-footprint complex

structure name	STRUCTURE OF A TRANSCRIPTION FACTOR AND DNA COMPLEX (Transcription factor TCP10)
reference	Zhang et al. 'To ? ? ?
source	Arabidopsis thaliana
experiment	X-ray (resolution=2.90, R-factor=0.184)
sequence family	TCP family transcription factor;
multimeric complexes	7vp1_AB 7vp2_AB 7vp4_AB 7vp4_EF 7vp4_IJ 7vp5_AB 7vp5_EF 7vp5_IJ 7vp7_AB
reference complex	7vp2_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7vp1_A interface=10,11,12,25,27, ghiiratrkDRHskvftskgprdrRvRmsahtaiqfydvqdrlgydrpskavdwlikkaktaidk
interface signature	DRHRR

Estimated binding specificities ?

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# IC=11.160 IC/col=1.116 n_of_columns=10

specificity:

A |   0   0   0   0   0   0   0  24   0  12
C |   0   0   0   0   0   0  96  48  96  48
G |   0  96   0  96  96   0   0   0   0  24
T |  96   0  96   0   0  96   0  24   0  12

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updated Fri Sep 13 08:18:52 2024