7vp1_A : 3D-footprint complex

structure name	STRUCTURE OF A TRANSCRIPTION FACTOR AND DNA COMPLEX (Transcription factor TCP10)
reference	Zhang et al. 'To ? ? ?
source	Arabidopsis thaliana
experiment	X-ray (resolution=2.90, R-factor=0.184)
sequence family	TCP family transcription factor;
multimeric complexes	7vp1_AB 7vp2_AB 7vp4_AB 7vp4_EF 7vp4_IJ 7vp5_AB 7vp5_EF 7vp5_IJ 7vp7_AB
reference complex	7vp2_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7vp1_A interface=10,11,12,25,27, ghiiratrkDRHskvftskgprdrRvRmsahtaiqfydvqdrlgydrpskavdwlikkaktaidk
interface signature	DRHRR

Estimated binding specificities ?

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# IC=10.999 IC/col=1.100 n_of_columns=10

specificity:

A |  12   0  12   0  96   0   0  96   0  96
C |  24   0  12   0   0  96  96   0  96   0
G |  48  96  48  96   0   0   0   0   0   0
T |  12   0  24   0   0   0   0   0   0   0

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updated Tue Dec 17 13:54:06 2024