7vp3_ILNP : 3D-footprint complex

structure name	STRUCTURE OF A TRANSCRIPTION FACTOR AND DNA COMPLEX
reference	Zhang et al. 'To ? ? ?
source	Arabidopsis thaliana
experiment	X-ray (resolution=3.00, R-factor=?)
reference complex	7vp3_D
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7vp3_I interface=4,5,6,15,17, stkDRHtkvegrgrRiRmpamcaarvfqltrelghksdgetiewllqqaepaviaatgt > 7vp3_L interface=4,6,15,17, stkDrHtkvegrgrRiRmpamcaarvfqltrelghksdgetiewllqqaepaviaatgt > 7vp3_N interface=3,4,5,14,16, tkDRHtkvegrgrRiRmpamcaarvfqltrelghksdgetiewllqqaepaviaatgtgtip > 7vp3_P interface=4,6,15,17, stkDrHtkvegrgrRiRmpamcaarvfqltrelghksdgetiewllqqaepaviaatgtgt
interface signature	DRHRR/DHRR/DRHRR/DHRR

Estimated binding specificities ?

readout + contact

# IC=15.054 IC/col=0.753 n_of_columns=20

specificity:

A |  15   1   0  31   2   0   5  58   2  53  10   4  11  15   0   1  20   3   0   2
C |   6   0   0  22  90  95  74  18  89  18  18   6  12   5   0   0  23  84  96  80
G |  69  95  96  21   3   1   4   8   3  17  16  81  13  72  95  95  20   5   0   2
T |   6   0   0  22   1   0  13  12   2   8  52   5  60   4   1   0  33   4   0  12

scan!

home
updated Sun Dec 15 16:18:06 2024