7wlr_D : 3D-footprint complex

Interface of input file ?

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	CRYO-EM STRUCTURE OF THE NUCLEOSOME CONTAINING KOMAGATAELLA PASTORIS HISTONES
experiment	NMR
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4;
multimeric complexes	7wlr_ABCDEFGH
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7wlr_D interface=1, Rkesyasyiykvlkqthpdtgisqkamsimnsfvndiferiaseasklasynkkstisareiqtavrlilpgelskhavsegtravtkytsstqa

  
  ----RA--                                     +6g0l_D    
                                  +------------1 
  --RC----                        !            +6qld_f    
                                  ! 
  --RA----              +---------7              +7xsx_a    
                        !         !            +-2 
  LC------              !         ! +----------3 +8bvw_e    
                        !         ! !          ! 
  --RT----              !         +-5          +8grq_A    
                    +--11           ! 
  LCRT----          !   !           +----------8hr1_E    
                    !   !  
  --RT----          !   !            +----------8u14_G    
                    !   !  +---------6 
  LARG----          !   +-10         +----------7unc_a    
                 +-12      !  
  --RG----       !  !      +--------------------8txv_G    
                 !  !  
  --RA----       !  !                          +1zla_C    
                 !  !           +--------------4 
  --RG----     -13  !      +----8              +8ox0_C    
                 !  !      !    ! 
  --RG----       !  +------9    +--------------5x0y_G    
                 !         ! 
  --RG----       !         +-------------------8jla_C    
                 !  
  --RA--RA       +-----------------------------6a5l_g

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updated Wed Dec 18 13:52:10 2024