7wlr_E : 3D-footprint complex

Interface of input file ?

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	CRYO-EM STRUCTURE OF THE NUCLEOSOME CONTAINING KOMAGATAELLA PASTORIS HISTONES
experiment	NMR
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4;
multimeric complexes	7wlr_ABCDEFGH
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7wlr_E interface=2,3,45, hRYkpgtvalreirrfqkstellirklpfqrlvreiaqdfktdlRfqssaigalqesveaylvslfedtnlcaihakrvtiqkkdillarrlrger

  
  RG--------                                 +8jh2_e    
                              +--------------3 
  RG--RT----          +-------6              +8grq_A    
                      !       ! 
  RGLCRT----       +--8       +---------------8hr1_E    
                   !  ! 
  ------RA--       !  +-----------------------6g0l_D    
                   !  
  ----RG----       !                          +8txv_G    
                 -10           +--------------1 
  ----RG----       !     +-----5              +5x0y_G    
                   !     !     ! 
  ----RG----       ! +---7     +--------------8ox0_C    
                   ! !   ! 
  ----RG----       ! !   +--------------------8jla_C    
                   +-9 
  ----RT----         !                         +8u14_G    
                     !                       +-2 
  ----RA----         +-----------------------4 +1zla_C    
                                             ! 
  ----RA--RA                                 +6a5l_g

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updated Wed Dec 18 13:54:19 2024