7wq5_A : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF ARABIDOPSIS TRANSCRIPTIONAL FACTOR WRINKLED1 WITH DSDNA (Ethylene-responsive transcription factor WRI1)
reference	Gao et al. 'Sci 8 eabq1211 2022
source	Arabidopsis thaliana
experiment	X-ray (resolution=2.35, R-factor=0.244)
structural superfamily	DNA-binding domain;
sequence family	AP2 domain;
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7wq5_A interface=12,14,16,21,23,25,40,42,114,116,117,123,125,134,136, strrssiyrgvTrHrWtgrfEaHlWdksswnsiqnkkgkQvYlgaydseeaaahtydlaalkywgpdtilnfpaetytkeleemqrvtkeeylaslrrqssgfsrgvskyrgvArHHhngrwEaRigrvfgnkYlYlgtyntqeeaaaaydmaaieyrganavtnfdisnyi
interface signature	THWEHWQYAHHERYY

Estimated binding specificities ?

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# IC=15.581 IC/col=0.917 n_of_columns=17

specificity:

A |  12   0   0   0   0   0  14  24  24  24   0  96   0   0   0   6   6
C |   0  96  96   0  96   0  12  24  24  24  96   0   0  96   0   8  76
G |  14   0   0   0   0  96  64  24  24  24   0   0   0   0  96   6   8
T |  70   0   0  96   0   0   6  24  24  24   0   0  96   0   0  76   6

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updated Wed Dec 18 13:59:06 2024