interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF ARABIDOPSIS TRANSCRIPTIONAL FACTOR WRINKLED1 WITH DSDNA
(Ethylene-responsive transcription factor WRI1)
referenceGao et al. 'Sci 8 eabq1211 2022
sourceArabidopsis thaliana
experimentX-ray (resolution=2.35, R-factor=0.244)
structural superfamilyDNA-binding domain;
sequence familyAP2 domain;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureTHWEHWQYAHHERYY

Estimated binding specificities ?

readout + contactlogo
# IC=15.663 IC/col=0.921 n_of_columns=17 specificity:   
A |  12   0   0   0   0   0  12  24  24  24   0  96   0   0   0   6   6
C |   6  96  96   0  96   0   0  24  24  24  96   0   0  96   0   6  78
G |  12   0   0   0   0  96  70  24  24  24   0   0   0   0  96   8   6
T |  66   0   0  96   0   0  14  24  24  24   0   0  96   0   0  76   6
scan!

home
updated Tue Jun 30 11:33:23 2026