7xaq_BDH : 3D-footprint complex

structure name	CRYO-EM STRUCTURE OF PVRA-DNA COMPLEX
experiment	NMR
structural superfamily	Homeodomain-like;Tetracyclin repressor-like, C-terminal domain;
reference complex	7xaq_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7xaq_B interface=11,32,33,34,44,46,48,49,52,53,109, eprkvrefrrReqeildtalklfleqgedsvTVEmiadavgigKgTiYKhfKSkaeiylrlmldyerdlaalfhsedvardkealsrayfefrmrdpqryrlfdrleeKvvktsqvpemveelhkirasnferltqlikeriadgklenvppyfhycaawalvhgavalyhspfwrevledqegffhflmdigvrmgnkrk > 7xaq_D interface=8,41,43,45,46,49, kvrefrrReqeildtalklfleqgedsvtvemiadavgigKgTiYKhfKskaeiylrlmldyerdlaalfhsedvardkealsrayfefrmrdpqryrlfdrleekvvktsqvpemveelhkirasnferltqlikeriadgklenvppyfhycaawalvhgavalyhspfwrevledqegffhflmdigvrmgnkrk > 7xaq_H interface=34,44, eprkvrefrrreqeildtalklfleqgedsvtvEmiadavgigKgtiykhfkskaeiylrlmldyerdlaalfhsedvardkealsrayfefrmrdpqryrlfdrleekvvktsqvpemveelhkirasnferltqlikeriadgklenvppyfhycaawalvhgavalyhspfwrevledqegffhflmdigvrmgnkrk
interface signature	RTVEKTYKKSK/RKTYKK/EK

Estimated binding specificities ?

readout + contact

# IC=12.019 IC/col=0.364 n_of_columns=33

specificity:

A |  19  13  20  24  24  24  24  24  24  24  24  24  24  24  24  24  24  22   0   4  30   4  14  24  24  24   0   4   0  96   0   0   4
C |  38  63  22  24  24  24  24  24  24  24  24  24  24  24  24  24  24  25   0  84  22   4  13  24  24  24   0   7   0   0  96  96   4
G |  20  10  34  24  24  24  24  24  24  24  24  24  24  24  24  24  24  27   0   4  22   4  13  24  24  24   0   4  96   0   0   0  84
T |  19  10  20  24  24  24  24  24  24  24  24  24  24  24  24  24  24  22  96   4  22  84  56  24  24  24  96  81   0   0   0   0   4

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updated Fri Aug 1 00:10:26 2025