7xfz_ABCD : 3D-footprint complex

structure name	CRYOEM STRUCTURE OF TYPE IV-A CSF-CRRNASP14-DSDNA TERNARY COMPLEX
experiment	NMR
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7xfz_A interface=51,75,79,120,121,175,178,179,182,187, mrypsdivdqvlkagpdkglltwegvdaacshcsrpiqngdlyspssvgaFfsdtrdlastsrsicwrcvvlrkKpmlYglsaavvtqdgiysiskdvnkawlfttpppapflvvhsssTMqhlswrtpvtldnrrihvrygpnlfivrpevvrkalsiadrvnegqkkwvtpvYfdRKaaAmghgLitragaemltqeeqeffqsvtpgerwalsylmhskrpepevgecitekvmtsln > 7xfz_B interface=77,111,117,119, vnlkvtidlsnpmmepgdllhldallgalrvsraraehgdainprdyhydlpleryqapsgdwvfkasafklkrqlPnqmwmqtgrlsiveaarhrqsgylqlragkpnpAggpfkTsIyhrpivqaeltafcvgdqqgieallsecrqiggkrgvgfgqvagfkvepvaetdcpwswralpadadprlvtseharciaairgpywdrtlhvealaptp > 7xfz_C interface=21,30,36,38,39,42,43,45,47,59,63,172,226,229,231,232,235,238, mqievtvrnitpifsaapgsNyitidgtiNpppgvSrFPlvRTrMmYvaadvgdgvikSvplQivpgntmrsllrrtmlkhviepalvekgnklsigayataysgnatgnpdgvpssfdeiatmrahpfiglfgggprmlegrlmvdslypihtnaerilgagyenemmsgPitqvvwarrmdpilnlgssedvevinggavaangwiqdllanskaaaskkkngRglKaFNahEvvIpglkwvwrisldrptdaqvglvllalnkmtneriagghskdygrfvidgvslngeqvwsqsgitggeqyfdavaeaidglsskefeqfaqs > 7xfz_D interface=47,59,111,139, mqievtvrnitpifsaapgsnyitidgtinpppgvsrfplvrtrmmYvaadvgdgvikSvplqivpgntmrsllrrtmlkhviepalvekgnklsigayataysgnatgnPdgvpssfdeiatmrahpfiglfgggprMlegrlmvdslypihtnaerilgagyenemmsgpitqvvwafnahevvipglkwvwrisldrptdaqvglvllalnkmtneriagghskdygrfvidgvslngeqvwsqsgitggeqyfdavaeaidglsskefeqfaqsak
interface signature	FKYTMYRKAL/PATI/NNSFPRTMYSQPRKFNEI/YSPM

Estimated binding specificities ?

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# IC=10.453 IC/col=0.475 n_of_columns=22

specificity:

A |  24  24  24  24  24  24  24  24  21  14   0   6  24  19  34   0  15   0  96   0   0   0
C |  24  24  24  24  24  24  24  24  21  14  96   6  24  20  20   0  17   0   0   0   0   0
G |  24  24  24  24  24  24  24  24  21  16   0   6  24  38  20   0  15   0   0   0   0   0
T |  24  24  24  24  24  24  24  24  33  52   0  78  24  19  22  96  49  96   0  96  96  96

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updated Sun Dec 17 15:46:45 2023