7xfz_ABCD : 3D-footprint complex

structure name	CRYOEM STRUCTURE OF TYPE IV-A CSF-CRRNASP14-DSDNA TERNARY COMPLEX
experiment	NMR
reference complex	7xfz_C
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7xfz_A interface=51,75,79,120,121,175,178,179,182,187, mrypsdivdqvlkagpdkglltwegvdaacshcsrpiqngdlyspssvgaFfsdtrdlastsrsicwrcvvlrkKpmlYglsaavvtqdgiysiskdvnkawlfttpppapflvvhsssTMqhlswrtpvtldnrrihvrygpnlfivrpevvrkalsiadrvnegqkkwvtpvYfdRKaaAmghgLitragaemltqeeqeffqsvtpgerwalsylmhskrpepevgecitekvmtsln > 7xfz_B interface=77,111,117,119, vnlkvtidlsnpmmepgdllhldallgalrvsraraehgdainprdyhydlpleryqapsgdwvfkasafklkrqlPnqmwmqtgrlsiveaarhrqsgylqlragkpnpAggpfkTsIyhrpivqaeltafcvgdqqgieallsecrqiggkrgvgfgqvagfkvepvaetdcpwswralpadadprlvtseharciaairgpywdrtlhvealaptp > 7xfz_C interface=21,30,36,38,39,42,43,45,47,59,63,172,226,229,231,232,235,238, mqievtvrnitpifsaapgsNyitidgtiNpppgvSrFPlvRTrMmYvaadvgdgvikSvplQivpgntmrsllrrtmlkhviepalvekgnklsigayataysgnatgnpdgvpssfdeiatmrahpfiglfgggprmlegrlmvdslypihtnaerilgagyenemmsgPitqvvwarrmdpilnlgssedvevinggavaangwiqdllanskaaaskkkngRglKaFNahEvvIpglkwvwrisldrptdaqvglvllalnkmtneriagghskdygrfvidgvslngeqvwsqsgitggeqyfdavaeaidglsskefeqfaqs > 7xfz_D interface=47,59,111,139, mqievtvrnitpifsaapgsnyitidgtinpppgvsrfplvrtrmmYvaadvgdgvikSvplqivpgntmrsllrrtmlkhviepalvekgnklsigayataysgnatgnPdgvpssfdeiatmrahpfiglfgggprMlegrlmvdslypihtnaerilgagyenemmsgpitqvvwafnahevvipglkwvwrisldrptdaqvglvllalnkmtneriagghskdygrfvidgvslngeqvwsqsgitggeqyfdavaeaidglsskefeqfaqsak
interface signature	FKYTMYRKAL/PATI/NNSFPRTMYSQPRKFNEI/YSPM

Estimated binding specificities ?

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# IC=12.934 IC/col=0.995 n_of_columns=13

specificity:

A |   0   0   0  24  16  56   0   8   0  96   0   0   0
C |   0  96   0  24  16  16   0   8   0   0   0   0   0
G |   0   0   0  24  48  16   0   8   0   0   0   0   0
T |  96   0  96  24  16   8  96  72  96   0  96  96  96

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updated Sun Dec 15 18:10:52 2024