7xg0_DEFGH : 3D-footprint complex

structure name	CRYOEM STRUCTURE OF TYPE IV-A CSF-CRRNA-DSDNA TERNARY COMPLEX
experiment	NMR
reference complex	7xfz_C
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7xg0_D interface=25,36,38,39,111,139,180,181,225,229,230,231, mqievtvrnitpifsaapgsnyitIdgtinpppgvSrFPlvrtrmmyvaadvgdgviksvplqivpgntmrsllrrtmlkhviepalvekgnklsigayataysgnatgnPdgvpssfdeiatmrahpfiglfgggprMlegrlmvdslypihtnaerilgagyenemmsgpitqvvwaRRmdpilnlgssedvevinggavaangwiqdllanskaaaskkkgRglkAFNahevvipglkwvwrisldrptdaqvglvllalnkmtneriagghskdygrfvidgvslngeqvwsqsgitggeqyfdavaeaidglsskefeqfaqsake > 7xg0_E interface=36,38,39,41,111,139,219,222,223,224,225, mqievtvrnitpifsaapgsnyitidgtinpppgvSrFPlVrtrmmyvaadvgdgviksvplqivpgntmrsllrrtmlkhviepalvekgnklsigayataysgnatgnPdgvpssfdeiatmrahpfiglfgggprMlegrlmvdslypihtnaerilgagyenemmsgpitqvvwarrmdpilnlgssedvevinggavaangwiqdllanskagRglKAFNahevvipglkwvwrisldrptdaqvglvllalnkmtneriagghskdygrfvidgvslngeqvwsqsgitggeqyfdavaeaidglsskefeqfaqsa > 7xg0_F interface=25,36,38,39,111,181,219,224,225, mqievtvrnitpifsaapgsnyitIdgtinpppgvSrFPlvrtrmmyvaadvgdgviksvplqivpgntmrsllrrtmlkhviepalvekgnklsigayataysgnatgnPdgvpssfdeiatmrahpfiglfgggprmlegrlmvdslypihtnaerilgagyenemmsgpitqvvwarRmdpilnlgssedvevinggavaangwiqdllanskagRglkaFNahevvipglkwvwrisldrptdaqvglvllalnkmtneriagghskdygrfvidgvslngeqvwsqsgitggeqyfdavaeaidglsskefeqfaqsa > 7xg0_G interface=39,111,139,181, mqievtvrnitpifsaapgsnyitidgtinpppgvsrfPlvrtrmmyvaadvgdgviksvplqivpgntmrsllrrtmlkhviepalvekgnklsigayataysgnatgnPdgvpssfdeiatmrahpfiglfgggprMlegrlmvdslypihtnaerilgagyenemmsgpitqvvwafNahevvipglkwvwrisldrptdaqvglvllalnkmtneriagghskdygrfvidgvslngeqvwsqsgitggeqyfdavaeaidglsskefeqfaqsak > 7xg0_H interface=106,228,229, mfvkqvffdlgarihadearalvakllddtqpglvsalmnympasktsktefplvqfsnfnqgfallgfgevgaqilsdatpiihdamaklfasrgqgvvvqvssRdvplscekrpyglqytvakmvvqkkhehrerlanpetgkvfleglflrslerqaaavgmvlprdlvvsfkgaervssvklrpdstlahgslrhavfevnarlgglwsvgfllskgfghintDLqlgqg
interface signature	ISFPPMRRRAFN/SFPVPMRKAFN/ISFPPRRFN/PPMN/RDL

Estimated binding specificities ?

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# IC=20.566 IC/col=0.791 n_of_columns=26

specificity:

A |   0  96   0  24  96  96   0   0  24  12   0   8   0  12  24  24  96   0   0   8   0  24  24  24  24   0
C |  96   0   0  24   0   0   0  96  24  12   0  76  96  12  24  24   0   0   0   6   0  24  24  24  24   0
G |   0   0   0  24   0   0  96   0  24   8   0   6   0  15  24  24   0  96  96   6  96  24  24  24  24   0
T |   0   0  96  24   0   0   0   0  24  64  96   6   0  57  24  24   0   0   0  76   0  24  24  24  24  96

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updated Sun Dec 15 18:11:50 2024