7xg2_DEFGH : 3D-footprint complex

structure name	CRYOEM STRUCTURE OF TYPE IV-A NTS-NICKED DSDNA BOUND CSF-CRRNA TERNARY COMPLEX
experiment	NMR
reference complex	7xfz_C
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7xg2_D interface=25,36,38,39,111,139,181,225,229,230,231, mqievtvrnitpifsaapgsnyitIdgtinpppgvSrFPlvrtrmmyvaadvgdgviksvplqivpgntmrsllrrtmlkhviepalvekgnklsigayataysgnatgnPdgvpssfdeiatmrahpfiglfgggprMlegrlmvdslypihtnaerilgagyenemmsgpitqvvwarRmdpilnlgssedvevinggavaangwiqdllanskaaaskkkgRglkAFNahevvipglkwvwrisldrptdaqvglvllalnkmtneriagghskdygrfvidgvslngeqvwsqsgitggeqyfdavaeaidglsskefeqfaqsake > 7xg2_E interface=25,36,38,39,111,139,220,224,225,226, mqievtvrnitpifsaapgsnyitIdgtinpppgvSrFPlvrtrmmyvaadvgdgviksvplqivpgntmrsllrrtmlkhviepalvekgnklsigayataysgnatgnPdgvpssfdeiatmrahpfiglfgggprMlegrlmvdslypihtnaerilgagyenemmsgpitqvvwarrmdpilnlgssedvevinggavaangwiqdllanskangRglkAFNahevvipglkwvwrisldrptdaqvglvllalnkmtneriagghskdygrfvidgvslngeqvwsqsgitggeqyfdavaeaidglsskefeqfaqsa > 7xg2_F interface=25,36,38,39,111,139,181,220,224,225,226, mqievtvrnitpifsaapgsnyitIdgtinpppgvSrFPlvrtrmmyvaadvgdgviksvplqivpgntmrsllrrtmlkhviepalvekgnklsigayataysgnatgnPdgvpssfdeiatmrahpfiglfgggprMlegrlmvdslypihtnaerilgagyenemmsgpitqvvwarRmdpilnlgssedvevinggavaangwiqdllanskangRglkAFNahevvipglkwvwrisldrptdaqvglvllalnkmtneriagghskdygrfvidgvslngeqvwsqsgitggeqyfdavaeaidglsskefeqfaqsa > 7xg2_G interface=39,111,181, mqievtvrnitpifsaapgsnyitidgtinpppgvsrfPlvrtrmmyvaadvgdgviksvplqivpgntmrsllrrtmlkhviepalvekgnklsigayataysgnatgnPdgvpssfdeiatmrahpfiglfgggprmlegrlmvdslypihtnaerilgagyenemmsgpitqvvwafNahevvipglkwvwrisldrptdaqvglvllalnkmtneriagghskdygrfvidgvslngeqvwsqsgitggeqyfdavaeaidglsskefeqfaqsak > 7xg2_H interface=106,229, mfvkqvffdlgarihadearalvakllddtqpglvsalmnympasktsktefplvqfsnfnqgfallgfgevgaqilsdatpiihdamaklfasrgqgvvvqvssRdvplscekrpyglqytvakmvvqkkhehrerlanpetgkvfleglflrslerqaaavgmvlprdlvvsfkgaervssvklrpdstlahgslrhavfevnarlgglwsvgfllskgfghintdLqlgqg
interface signature	ISFPPMRRAFN/ISFPPMRAFN/ISFPPMRRAFN/PPN/RL

Estimated binding specificities ?

contact

# IC=20.950 IC/col=0.776 n_of_columns=27

specificity:

A |   0  96   0  24  96  96   0   7  24  24   0   9   0  24   7  24  96   0   0   0   0  24  24  24  24   0   7
C |  96   0   0  24   0   0   0  73  24  24   0  73  96  24   9  24   0   0   0   0   0  24  24  24  24   0  75
G |   0   0   0  24   0   0  96   7  24  24   0   7   0  24   7  24   0  96  96   0  96  24  24  24  24   0   7
T |   0   0  96  24   0   0   0   9  24  24  96   7   0  24  73  24   0   0   0  96   0  24  24  24  24  96   7

scan!

home
updated Sun Dec 15 18:12:47 2024