7xg3_DEFGH : 3D-footprint complex

structure name	CRYOEM STRUCTURE OF TYPE IV-A CASDING BOUND NTS-NICKED CSF-CRRNA- DSDNA QUATERNARY COMPLEX
experiment	NMR
reference complex	7xfz_C
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7xg3_D interface=38,39,111,180,181,224,227,228,229,230, mqievtvrnitpifsaapgsnyitidgtinpppgvsrFPlvrtrmmyvaadvgdgviksvplqivpgntmrsllrrtmlkhviepalvekgnklsigayataysgnatgnPdgvpssfdeiatmrahpfiglfgggprmlegrlmvdslypihtnaerilgagyenemmsgpitqvvwaRRmdpilnlgssedvevinggavaangwiqdllanskaaaskkgRglKAFNahevvipglkwvwrisldrptdaqvglvllalnkmtneriagghskdygrfvidgvslngeqvwsqsgitggeqyfdavaeaidglsskefeqfaqsak > 7xg3_E interface=25,36,38,39,111,139,181,219,223,224,225, mqievtvrnitpifsaapgsnyitIdgtinpppgvSrFPlvrtrmmyvaadvgdgviksvplqivpgntmrsllrrtmlkhviepalvekgnklsigayataysgnatgnPdgvpssfdeiatmrahpfiglfgggprMlegrlmvdslypihtnaerilgagyenemmsgpitqvvwarRmdpilnlgssedvevinggavaangwiqdllanskngRglkAFNahevvipglkwvwrisldrptdaqvglvllalnkmtneriagghskdygrfvidgvslngeqvwsqsgitggeqyfdavaeaidglsskefeqfaqsa > 7xg3_F interface=36,38,39,41,139,181,223,224, mqievtvrnitpifsaapgsnyitidgtinpppgvSrFPlVrtrmmyvaadvgdgviksvplqivpgntmrsllrrtmlkhviepalvekgnklsigayataysgnatgnpdgvpssfdeiatmrahpfiglfgggprMlegrlmvdslypihtnaerilgagyenemmsgpitqvvwarRmdpilnlgssedvevinggavaangwiqdllanskgrglkaFNahevvipglkwvwrisldrptdaqvglvllalnkmtneriagghskdygrfvidgvslngeqvwsqsgitggeqyfdavaeaidglsskefeqfaqsa > 7xg3_G interface=87, mqievtvrnitpifplvrtrmmyvaadvgdgviksvplqivpgntmrsllrrtmlkhviepalvekgnklsigayataysgnatgnPdgvpssfdeiatmrahpfiglfgggprmlegrlmvdslypihtnaerilgagyenemmsgpitahevvipglkwvwrisldrptdaqvglvllalnkmtneriagghskdygrfvidgvslngeqvwsqsgitggeqyfdavaeaidglsskefeqfaqsak > 7xg3_H interface=106, mfvkqvffdlgarihadearalvakllddtqpglvsalmnympasktsktefplvqfsnfnqgfallgfgevgaqilsdatpiihdamaklfasrgqgvvvqvssRdvplscekrpyglqytvakmvvqkkhehrerlanpetgkvfleglflrslerqaaavgmvlprdlvvsfkgaervssvklrpdstlahgslrhavfevnarlgglwsvgfllskgfghintdlqlgqg
interface signature	FPPRRRKAFN/ISFPPMRRAFN/SFPVMRFN/P/R

Estimated binding specificities ?

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# IC=17.195 IC/col=0.716 n_of_columns=24

specificity:

A |   0  24  96  96   0  12  12  24   0   0   0   4  24  24  96   0   0   8   0  24  24  24  24  12
C |   0  24   0   0   0  64  60  24   0  96  96   4  24  24   0   0   0   8   0  24  24  24  24   8
G |   0  24   0   0  96  12  12  24   0   0   0   4  24  24   0  96  96   8  96  24  24  24  24   8
T |  96  24   0   0   0   8  12  24  96   0   0  84  24  24   0   0   0  72   0  24  24  24  24  68

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updated Sun Dec 15 18:13:29 2024