7xg4_ABCD : 3D-footprint complex

structure name	CRYOEM STRUCTURE OF TYPE IV-A CASDING BOUND NTS-NICKED CSF-CRRNA- DSDNA QUATERNARY COMPLEX IN A SECOND STATE
experiment	NMR
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7xg4_A interface=51,75,79,120,121,175, mrypsdivdqvlkagpdkglltwegvdaacshcsrpiqngdlyspssvgaFfsdtrdlastsrsicwrcvvlrkKpmlYglsaavvtqdgiysiskdvnkawlfttpppapflvvhsssTMqhlswrtpvtldnrrihvrygpnlfivrpevvrkalsiadrvnegqkkwvtpvYfdrkaaamghglitragaemltqeeqeffqsvtpgerwalsylmhskrpepevgecitekvmtsln > 7xg4_B interface=86,104,109,111,117,119, vnlkvtidlsnpmmepgdllhldallgalrvsraraehgdainprdyhydlpleryqapsgdwvfkasafklkrqlpnqmwmqtgRlsiveaarhrqsgylqlRagkpNpAggpfkTsIyhrpivqaeltafcvgdqqgieallsecrqiggkrgvgfgqvagfkvepvaetdcpwswralpadadprlvtseharciaairgpywdrtlhvealaptp > 7xg4_C interface=21,22,28,29,30,32,33,36,38,39,42,181,226,229,230,231,232,235, mqievtvrnitpifsaapgsNYitidgTINpPPgvSrFPlvRtrmmyvaadvgdgviksvplqivpgntmrsllrrtmlkhviepalvekgnklsigayataysgnatgnpdgvpssfdeiatmrahpfiglfgggprmlegrlmvdslypihtnaerilgagyenemmsgpitqvvwarRmdpilnlgssedvevinggavaangwiqdllanskaaaskkkngRglKAFNahEvvipglkwvwrisldrptdaqvglvllalnkmtneriagghskdygrfvidgvslngeqvwsqsgitggeqyfdavaeaidglsskefeqfaqs > 7xg4_D interface=30,38,39,42,111,139,180,181,218,221,225,229,230,231, mqievtvrnitpifsaapgsnyitidgtiNpppgvsrFPlvRtrmmyvaadvgdgviksvplqivpgntmrsllrrtmlkhviepalvekgnklsigayataysgnatgnPdgvpssfdeiatmrahpfiglfgggprMlegrlmvdslypihtnaerilgagyenemmsgpitqvvwaRRmdpilnlgssedvevinggavaangwiqdllanskaAasKkkgRglkAFNahevvipglkwvwrisldrptdaqvglvllalnkmtneriagghskdygrfvidgvslngeqvwsqsgitggeqyfdavaeaidglsskefeqfaqsake
interface signature	FKYTMY/RRNATI/NYTINPPSFPRRRKAFNE/NFPRPMRRAKRAFN

Estimated binding specificities ?

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# IC=12.809 IC/col=0.356 n_of_columns=36

specificity:

A |  24  38  19  24  19  21  15   4   0  74  24  17  34   0  13  96   0   0  52   0   6  96  10  24  24  24  24  24  24  24  24  24  24  24  24  24
C |  24  19  38  24  39  21  17   4  96   7  24  15  22   0  14   0   0   0  14   0   6   0  10  24  24  24  24  24  24  24  24  24  24  24  24  24
G |  24  19  20  24  19  21  15   4   0   8  24  15  20   0  13   0   0   0  16   0   6   0  10  24  24  24  24  24  24  24  24  24  24  24  24  24
T |  24  20  19  24  19  33  49  84   0   7  24  49  20  96  56   0  96  96  14  96  78   0  66  24  24  24  24  24  24  24  24  24  24  24  24  24

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updated Sun Dec 17 15:49:52 2023