7xg4_EFGH : 3D-footprint complex

structure name	CRYOEM STRUCTURE OF TYPE IV-A CASDING BOUND NTS-NICKED CSF-CRRNA- DSDNA QUATERNARY COMPLEX IN A SECOND STATE
experiment	NMR
reference complex	7xfz_C
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7xg4_E interface=36,38,39,111,139,181,220,224,225,226, mqievtvrnitpifsaapgsnyitidgtinpppgvSrFPlvrtrmmyvaadvgdgviksvplqivpgntmrsllrrtmlkhviepalvekgnklsigayataysgnatgnPdgvpssfdeiatmrahpfiglfgggprMlegrlmvdslypihtnaerilgagyenemmsgpitqvvwarRmdpilnlgssedvevinggavaangwiqdllanskangRglkAFNahevvipglkwvwrisldrptdaqvglvllalnkmtneriagghskdygrfvidgvslngeqvwsqsgitggeqyfdavaeaidglsskefeqfaqsa > 7xg4_F interface=25,36,38,39,111,139,181,224,225,226, mqievtvrnitpifsaapgsnyitIdgtinpppgvSrFPlvrtrmmyvaadvgdgviksvplqivpgntmrsllrrtmlkhviepalvekgnklsigayataysgnatgnPdgvpssfdeiatmrahpfiglfgggprMlegrlmvdslypihtnaerilgagyenemmsgpitqvvwarRmdpilnlgssedvevinggavaangwiqdllanskangrglkAFNahevvipglkwvwrisldrptdaqvglvllalnkmtneriagghskdygrfvidgvslngeqvwsqsgitggeqyfdavaeaidglsskefeqfaqsa > 7xg4_G interface=39,111,139,181, mqievtvrnitpifsaapgsnyitidgtinpppgvsrfPlvrtrmmyvaadvgdgviksvplqivpgntmrsllrrtmlkhviepalvekgnklsigayataysgnatgnPdgvpssfdeiatmrahpfiglfgggprMlegrlmvdslypihtnaerilgagyenemmsgpitqvvwafNahevvipglkwvwrisldrptdaqvglvllalnkmtneriagghskdygrfvidgvslngeqvwsqsgitggeqyfdavaeaidglsskefeqfaqsak > 7xg4_H interface=106,229,233, mfvkqvffdlgarihadearalvakllddtqpglvsalmnympasktsktefplvqfsnfnqgfallgfgevgaqilsdatpiihdamaklfasrgqgvvvqvssRdvplscekrpyglqytvakmvvqkkhehrerlanpetgkvfleglflrslerqaaavgmvlprdlvvsfkgaervssvklrpdstlahgslrhavfevnarlgglwsvgfllskgfghintdLqlgQg
interface signature	SFPPMRRAFN/ISFPPMRAFN/PPMN/RLQ

Estimated binding specificities ?

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# IC=15.407 IC/col=0.770 n_of_columns=20

specificity:

A |  96   6  24  96  96   0   6   0  24   0   0   0   6   6  24  24  24  24   6   0
C |   0   6  24   0   0   0  78  96  24   0  96  96   6   6  24  24  24  24   6   0
G |   0   6  24   0   0  96   6   0  24   0   0   0   6   6  24  24  24  24   6  96
T |   0  78  24   0   0   0   6   0  24  96   0   0  78  78  24  24  24  24  78   0

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updated Sun Dec 15 18:14:33 2024