interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF THE NPAS4-ARNT2 HETERODIMER IN COMPLEX WITH DNA
referenceJing et al. 'to ? ? ?
experimentX-ray (resolution=4.27, R-factor=0.252)
structural superfamilyPYP-like sensor domain PAS domain;HLH, helix-loop-helix DNA-binding domain;
sequence familyPAS fold; Helixloophelix DNAbinding domain;
multimeric complexes7xi3_AB
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureHSIERR

Estimated binding specificities ?

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# IC=6.292 IC/col=0.787 n_of_columns=8 specificity:   
A |   0   0  73  24   7  96   7   9
C |   0  96   9  24   7   0  73  73
G |   0   0   7  24  75   0   9   7
T |  96   0   7  24   7   0   7   7
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updated Sat Sep 14 07:18:05 2024