interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF THE NPAS4-ARNT2 HETERODIMER IN COMPLEX WITH DNA
referenceJing et al. 'to ? ? ?
experimentX-ray (resolution=4.27, R-factor=0.252)
structural superfamilyPYP-like sensor domain PAS domain;HLH, helix-loop-helix DNA-binding domain;
sequence familyPAS fold; Helixloophelix DNAbinding domain;
multimeric complexes7xi3_AB
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureHSIERR

Estimated binding specificities ?

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# IC=4.250 IC/col=0.850 n_of_columns=5 specificity:   
A |  12  12   0  96   0
C |  60  12   0   0   0
G |  12  60   0   0  84
T |  12  12  96   0  12
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updated Wed Dec 18 14:09:47 2024