7xp3_AB : 3D-footprint complex

structure name	DNA COMPLEX FORM OF ORESARA1(ANAC092) NAC DOMAIN
reference	Chun et al.
experiment	X-ray (resolution=3.25, R-factor=?)
structural superfamily	NAC domain;
reference complex	7xp3_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7xp3_A interface=69,74,85,87,109,114, idlppgfrfhptdeelithylkpkvfntffsataigevdlnkiepwdlpwkakmgekewyffcvrdrkYptglRtnrateagywKaTgkdkeifkgkslvgmkktlvfYkgraPkgvktnwvmheyrlegkycienlpqtaknewvicrvfqk > 7xp3_B interface=64,69,80,82,84,104,109,110, dlppgfrfhptdeelithylkpkvfntfftaigevdlnkiepwdlpwkmgekewyffcvrdrkYptglRtnrateagywKaTgKdkeifkgkslvgmkktlvfYkgraPKgvktnwvmheyrlegkycienlpqtaknewvicrvfqk
interface signature	YRKTYP/YRKTKYPK

Estimated binding specificities ?

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# IC=17.805 IC/col=0.848 n_of_columns=21

specificity:

A |   0   0   2   2   2   2   0  90  24  24  24  24  24   2  81   0   0   5  93  96   0
C |   3   0   2   2  87   2   2   2  24  24  24  24  24  87   2  96   0  11   0   0  96
G |  93   0   2  90   5  90   0   2  24  24  24  24  24   5   2   0  96   8   2   0   0
T |   0  96  90   2   2   2  94   2  24  24  24  24  24   2  11   0   0  72   1   0   0

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updated Wed Sep 11 17:25:42 2024