7xur_AB : 3D-footprint complex

structure name	THE CRYO-EM STRUCTURE OF HUMAN MINI-SNAPC IN COMPLEX WITH HU6-1 PSE
experiment	NMR
structural superfamily	Homeodomain-like;
reference complex	7xur_A 7xur_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7xur_A interface=193,194,198,241,245,246,250,251,297,298,301, hfmkpyfkdkvtgvgppanedtrekaaqgikafeellvtkwknwekallrksvvsdrkeiqdinqlpeeallwekisninfaeeirkfwqnsehpsinkqewsreeeerlqaiaaahghlewqkiaeelgtsrsafqclqkfqqhnkalkrkewteeedrmltqlvqemrvgshipyrrivyymegrdsmqlIYrwtKsldpglkkgywapeedakllqavakygeqdwfkireevpgrsDaqcRDrylRRlhfslkkgrwnlkeeeqlieliekygvghwakiaselphrsgsqcLSkwKimmgkk > 7xur_B interface=104,107,150,302, nfpeyelpelntrafhvgafgelwrgrlrgagdlslrepadsdredaavardldcsleaaaelravcgldkldpevipentdlvtlgvrkrflehreetitidRacRqetfvyemeshaigkkpensadmieegelilsvnilypvifhKhkehkpyqtmlvlgsqkltqlrdsircvsdlqiggefsntpdqiskdlyksaffyfegtfyndkrypecrdlsrtiiewseshdrgygkfqtarmedftfndlciklgfpylychqgdcehvivitdirlvhhddcldrtlypllikkhwlWtrkcfvckmytarwvtnndsfapedpcffcdvcfrmlhydsegnklgeflaypyvdpgtfn
interface signature	IYKDRDRRLSK/RRKW

Estimated binding specificities ?

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# IC=11.820 IC/col=0.739 n_of_columns=16

specificity:

A |  88   2  24  11   2   2  88  11  24  24  96   0   4   0  24  96
C |   2  88  24  11   4  90   4  11  24  24   0  96   2   3  24   0
G |   4   2  24  14   2   2   2  60  24  24   0   0  88  93  24   0
T |   2   4  24  60  88   2   2  14  24  24   0   0   2   0  24   0

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updated Sun Dec 15 18:35:32 2024