7xur_AB : 3D-footprint complex

structure name	THE CRYO-EM STRUCTURE OF HUMAN MINI-SNAPC IN COMPLEX WITH HU6-1 PSE
experiment	NMR
structural superfamily	Homeodomain-like;
reference complex	7xur_A 7xur_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7xur_A interface=193,194,198,241,245,246,250,251,297,298,301, hfmkpyfkdkvtgvgppanedtrekaaqgikafeellvtkwknwekallrksvvsdrkeiqdinqlpeeallwekisninfaeeirkfwqnsehpsinkqewsreeeerlqaiaaahghlewqkiaeelgtsrsafqclqkfqqhnkalkrkewteeedrmltqlvqemrvgshipyrrivyymegrdsmqlIYrwtKsldpglkkgywapeedakllqavakygeqdwfkireevpgrsDaqcRDrylRRlhfslkkgrwnlkeeeqlieliekygvghwakiaselphrsgsqcLSkwKimmgkk > 7xur_B interface=104,107,150,302, nfpeyelpelntrafhvgafgelwrgrlrgagdlslrepadsdredaavardldcsleaaaelravcgldkldpevipentdlvtlgvrkrflehreetitidRacRqetfvyemeshaigkkpensadmieegelilsvnilypvifhKhkehkpyqtmlvlgsqkltqlrdsircvsdlqiggefsntpdqiskdlyksaffyfegtfyndkrypecrdlsrtiiewseshdrgygkfqtarmedftfndlciklgfpylychqgdcehvivitdirlvhhddcldrtlypllikkhwlWtrkcfvckmytarwvtnndsfapedpcffcdvcfrmlhydsegnklgeflaypyvdpgtfn
interface signature	IYKDRDRRLSK/RRKW

Estimated binding specificities ?

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# IC=11.730 IC/col=0.733 n_of_columns=16

specificity:

A |   4  24   4   4   2   0  24  24   7   2   0  84  72  24   2   2
C |   2  24  88  88   4   0  24  24  76   4   0   4   4  24   2   2
G |   2  24   2   2  88   0  24  24   9   2  94   0  11  24  90   2
T |  88  24   2   2   2  96  24  24   4  88   2   8   9  24   2  90

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updated Wed Sep 11 17:33:36 2024