interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF A HDAC4-MEF2A-DNA TERNARY COMPLEX
referenceCayford et al. 'To ? ? ?
experimentX-ray (resolution=3.59, R-factor=0.261)
structural superfamilySRF-like;
sequence familySRFtype transcription factor DNAbinding a;
multimeric complexes1c7u_AB 3kov_AB 3kov_IJ 3p57_AB 3p57_CD 3p57_IJ 7xuz_CD 7xuz_GH
redundant complexes3kov_I 3p57_I 1c7u
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRK

Estimated binding specificities ?

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# IC=3.101 IC/col=0.775 n_of_columns=4 specificity:   
A |  16   0   0  54
C |  54   0   0  13
G |  13   0   0  16
T |  13  96  96  13
scan!

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updated Sat Sep 14 07:24:58 2024